4.8 Article

Promoter directionality is controlled by U1 snRNP and polyadenylation signals

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

An upstream promoter element blocks the reverse transcription of the mouse insulin-degrading enzyme gene

Lang Zhang et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2013)

Article Multidisciplinary Sciences

Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells

Alla A. Sigova et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Biochemistry & Molecular Biology

U1 snRNP Determines mRNA Length and Regulates Isoform Expression

Michael G. Berg et al.

Article Cell Biology

Promoter-proximal polyadenylation sites reduce transcription activity

Pia K. Andersen et al.

GENES & DEVELOPMENT (2012)

Article Biochemistry & Molecular Biology

A quantitative atlas of polyadenylation in five mammals

Adnan Derti et al.

GENOME RESEARCH (2012)

Article Multidisciplinary Sciences

Landscape of transcription in human cells

Sarah Djebali et al.

NATURE (2012)

Review Genetics & Heredity

Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans

Karen Adelman et al.

NATURE REVIEWS GENETICS (2012)

Article Biochemical Research Methods

FIMO: scanning for occurrences of a given motif

Charles E. Grant et al.

BIOINFORMATICS (2011)

Review Cell Biology

Ending the message: poly(A) signals then and now

Nick J. Proudfoot

GENES & DEVELOPMENT (2011)

Article Multidisciplinary Sciences

Antisense RNA polymerase II divergent transcripts are P-TEFb dependent and substrates for the RNA exosome

Ryan A. Flynn et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biochemistry & Molecular Biology

c-Myc Regulates Transcriptional Pause Release

Peter B. Rahl et al.

Article Multidisciplinary Sciences

U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation

Daisuke Kaida et al.

NATURE (2010)

Article Biotechnology & Applied Microbiology

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead et al.

GENOME BIOLOGY (2009)

Article Multidisciplinary Sciences

Divergent Transcription from Active Promoters

Amy C. Seila et al.

SCIENCE (2008)

Article Multidisciplinary Sciences

RNA Exosome Depletion Reveals Transcription Upstream of Active Human Promoters

Pascal Preker et al.

SCIENCE (2008)

Article Multidisciplinary Sciences

Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters

Leighton J. Core et al.

SCIENCE (2008)

Article Biotechnology & Applied Microbiology

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang et al.

GENOME BIOLOGY (2008)

Article Biochemistry & Molecular Biology

Termination of cryptic unstable transcripts is directed by yeast RNA-Binding proteins Nrd1 and Nab3

John T. Arigo et al.

MOLECULAR CELL (2006)

Article Biochemistry & Molecular Biology

RNA degradation by the exosome is promoted by a nuclear polyade nylation complex

J LaCava et al.

Article Biochemistry & Molecular Biology

A new yeast poly(A) polymerase complex involved in RNA quality control

S Vanácová et al.

PLOS BIOLOGY (2005)

Article Biochemistry & Molecular Biology

A large-scale analysis of mRNA polyadenylation of human and mouse genes

B Tian et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemical Research Methods

Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals

G Yeo et al.

JOURNAL OF COMPUTATIONAL BIOLOGY (2004)

Article Biochemistry & Molecular Biology

Patterns of variant polyadenylation signal usage in human genes

E Beaudoing et al.

GENOME RESEARCH (2000)