4.8 Article

A physical, genetic and functional sequence assembly of the barley genome

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Diverse functions of nuclear non-coding RNAs in eukaryotic gene expression

Madoka Chinen et al.

FRONTIERS IN BIOSCIENCE-LANDMARK (2012)

Review Multidisciplinary Sciences

Modular regulatory principles of large non-coding RNAs

Mitchell Guttman et al.

NATURE (2012)

Article Biochemical Research Methods

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

Cole Trapnell et al.

NATURE PROTOCOLS (2012)

Article Biochemistry & Molecular Biology

Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis

Maria Kalyna et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Multidisciplinary Sciences

Evolution of wild cereals during 28 years of global warming in Israel

Eviatar Nevo et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Biotechnology & Applied Microbiology

BAC library resources for map-based cloning and physical map construction in barley (Hordeum vulgare L.)

Daniela Schulte et al.

BMC GENOMICS (2011)

Article Plant Sciences

Nonsense-Mediated mRNA Decay Factors, UPF1 and UPF3, Contribute to Plant Defense

Hee-Jeong Jeong et al.

PLANT AND CELL PHYSIOLOGY (2011)

Article Biochemistry & Molecular Biology

Unlocking the Barley Genome by Chromosomal and Comparative Genomics

Klaus F. X. Mayer et al.

PLANT CELL (2011)

Article Multidisciplinary Sciences

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

Robert J. Elshire et al.

PLOS ONE (2011)

Article Agronomy

Patterns of polymorphism and linkage disequilibrium in cultivated barley

Jordi Comadran et al.

THEORETICAL AND APPLIED GENETICS (2011)

Review Biochemistry & Molecular Biology

NMD: RNA biology meets human genetic medicine

Madhuri Bhuvanagiri et al.

BIOCHEMICAL JOURNAL (2010)

Article Biochemistry & Molecular Biology

Function annotation of the rice transcriptome at single-nucleotide resolution by RNA-seq

Tingting Lu et al.

GENOME RESEARCH (2010)

Article Biochemistry & Molecular Biology

Diversity at the Mla Powdery Mildew Resistance Locus from Cultivated Barley Reveals Sites of Positive Selection

Sabine Seeholzer et al.

MOLECULAR PLANT-MICROBE INTERACTIONS (2010)

Article Multidisciplinary Sciences

Genome sequencing and analysis of the model grass Brachypodium distachyon

John P. Vogel et al.

NATURE (2010)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Article Biotechnology & Applied Microbiology

Development and implementation of high-throughput SNP genotyping in barley

Timothy J. Close et al.

BMC GENOMICS (2009)

Article Multidisciplinary Sciences

The Sorghum bicolor genome and the diversification of grasses

Andrew H. Paterson et al.

NATURE (2009)

Review Multidisciplinary Sciences

The nature of selection during plant domestication

Michael D. Purugganan et al.

NATURE (2009)

Article Multidisciplinary Sciences

The B73 Maize Genome: Complexity, Diversity, and Dynamics

Patrick S. Schnable et al.

SCIENCE (2009)

Review Plant Sciences

To check or not to check? The application of meiotic studies to plant breeding

Enrique Martinez-Perez et al.

CURRENT OPINION IN PLANT BIOLOGY (2008)

Article Biochemistry & Molecular Biology

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

Daniel R. Zerbino et al.

GENOME RESEARCH (2008)

Article Multidisciplinary Sciences

A physical map of the 1-gigabase bread wheat chromosome 3B

Etienne Paux et al.

SCIENCE (2008)

Article Biochemistry & Molecular Biology

An improved method to identify BAC clones using pooled overgos

Kavitha Madishetty et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Computer Science, Information Systems

Engineering a software tool for gene structure prediction in higher organisms

G Gremme et al.

INFORMATION AND SOFTWARE TECHNOLOGY (2005)

Article Multidisciplinary Sciences

The map-based sequence of the rice genome

T Matsumoto et al.

NATURE (2005)

Review Cell Biology

Nonsense-mediated mRNA decay: molecular insights and mechanistic variations across species

E Conti et al.

CURRENT OPINION IN CELL BIOLOGY (2005)

Article Plant Sciences

MetaCyc and AraCyc. Metabolic pathway databases for plant research

PF Zhang et al.

PLANT PHYSIOLOGY (2005)

Review Cell Biology

SINEs and LINEs: symbionts of eukaryotic genomes with a common tail

K Ohshima et al.

CYTOGENETIC AND GENOME RESEARCH (2005)

Article Multidisciplinary Sciences

Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans

BP Lewis et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Article Biochemistry & Molecular Biology

An Arabidopsis callose synthase, GSL5, is required for wound and papillary callose formation

AK Jacobs et al.

PLANT CELL (2003)

Article Biochemistry & Molecular Biology

Genome dynamics and evolution of the Mla (powdery mildew) resistance locus in barley

FS Wei et al.

PLANT CELL (2002)

Article Biochemical Research Methods

DNA sequence quality trimming and vector removal

HH Chou et al.

BIOINFORMATICS (2001)

Article Biochemistry & Molecular Biology

Contigs built with fingerprints, markers, and FPCV4.7

C Soderlund et al.

GENOME RESEARCH (2000)