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Multiplexed Aptasensors and Amplified DNA Sensors Using Functionalized Graphene Oxide: Application for Logic Gate Operations
Xiaoqing Liu et al.
ACS NANO (2012)
Re-engineering Electrochemical Biosensors To Narrow or Extend Their Useful Dynamic Range
Di Kang et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2012)
Enantioselective Diels-Alder Reactions with G-Quadruplex DNA-Based Catalysts
Changhao Wang et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2012)
Expanding the Rule Set of DNA Circuitry with Associative Toehold Activation
Xi Chen
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
Macroscopic Volume Change of Dynamic Hydrogels Induced by Reversible DNA Hybridization
Lu Peng et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
Rational Design of Allosteric Inhibitors and Activators Using the Population-Shift Model: In Vitro Validation and Application to an Artificial Biosensor
Francesco Ricci et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
Probing Spatial Organization of DNA Strands Using Enzyme-Free Hairpin Assembly Circuits
Bingling Li et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
Engineering Biosensors with Extended, Narrowed, or Arbitrarily Edited Dynamic Range
Alexis Vallee-Belisle et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
L-DNA Molecular Beacon: A Safe, Stable, and Accurate Intracellular Nano-thermometer for Temperature Sensing in Living Cells
Guoliang Ke et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
Using Distal-Site Mutations and Allosteric Inhibition To Tune, Extend, and Narrow the Useful Dynamic Range of Aptamer-Based Sensors
Alessandro Porchetta et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
Bioelectrochemical Switches for the Quantitative Detection of Antibodies Directly in Whole Blood
Alexis Vallee-Belisle et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
Nanotechnology in therapeutics: a focus on nanoparticles as a drug delivery system
Suwussa Bamrungsap et al.
NANOMEDICINE (2012)
Fluorescence Imaging of Cellular Metabolites with RNA
Jeremy S. Paige et al.
SCIENCE (2012)
A Logic-Gated Nanorobot for Targeted Transport of Molecular Payloads
Shawn M. Douglas et al.
SCIENCE (2012)
Applications of Aptasensors in Clinical Diagnostics
Ping Hong et al.
SENSORS (2012)
Challenges and Opportunities for Small Molecule Aptamer Development
Maureen McKeague et al.
JOURNAL OF NUCLEIC ACIDS (2012)
Smart Drug Delivery through DNA/Magnetic Nanoparticle Gates
Eduardo Ruiz-Hernandez et al.
ACS NANO (2011)
Pb2+ induced DNA conformational switch from hairpin to G-quadruplex: electrochemical detection of Pb2+
Zhenzhen Lin et al.
ANALYST (2011)
Peroxidase-mimicking DNAzymes for biosensing applications: A review
Joanna Kosman et al.
ANALYTICA CHIMICA ACTA (2011)
Use of Fluorescent DNA-Templated Gold/Silver Nanoclusters for the Detection of Sulfide Ions
Wei-Yu Chen et al.
ANALYTICAL CHEMISTRY (2011)
Nucleic Acid Based Molecular Devices
Yamuna Krishnan et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2011)
A Responsive Hidden Toehold To Enable Controllable DNA Strand Displacement Reactions
Yongzheng Xing et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2011)
Molecular beacon-based bioimaging of multiple microRNAs during myogenesis
Won Jun Kang et al.
BIOMATERIALS (2011)
Measuring Thermodynamic Details of DNA Hybridization Using Fluorescence
Yong You et al.
BIOPOLYMERS (2011)
DNA origami: a quantum leap for self-assembly of complex structures
Thomas Torring et al.
CHEMICAL SOCIETY REVIEWS (2011)
Control of DNA hybridization by photoswitchable molecular glue
Chikara Dohno et al.
CHEMICAL SOCIETY REVIEWS (2011)
NUPACK: Analysis and Design of Nucleic Acid Systems
Joseph N. Zadeh et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2011)
Cooperative Hybridization of Oligonucleotides
David Yu Zhang
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)
Transcription Factor Beacons for the Quantitative Detection of DNA Binding Activity
Alexis Vallee-Belisle et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)
Photoresponsive DNA-Cross-Linked Hydrogels for Controllable Release and Cancer Therapy
Huaizhi Kang et al.
LANGMUIR (2011)
DNA Machines: Bipedal Walker and Stepper
Zhen-Gang Wang et al.
NANO LETTERS (2011)
Dynamic DNA nanotechnology using strand-displacement reactions
David Yu Zhang et al.
NATURE CHEMISTRY (2011)
A primer to scaffolded DNA origami
Carlos Ernesto Castro et al.
NATURE METHODS (2011)
Cell-surface sensors for real-time probing of cellular environments
Weian Zhao et al.
NATURE NANOTECHNOLOGY (2011)
Rational, modular adaptation of enzyme-free DNA circuits to multiple detection methods
Bingling Li et al.
NUCLEIC ACIDS RESEARCH (2011)
RNA Mimics of Green Fluorescent Protein
Jeremy S. Paige et al.
SCIENCE (2011)
Scaling Up Digital Circuit Computation with DNA Strand Displacement Cascades
Lulu Qian et al.
SCIENCE (2011)
A synthetic icosahedral DNA-based host-cargo complex for functional in vivo imaging
Dhiraj Bhatia et al.
NATURE COMMUNICATIONS (2011)
DNA-based switchable devices and materials
Dongsheng Liu et al.
NPG ASIA MATERIALS (2011)
High-Precision, In Vitro Validation of the Sequestration Mechanism for Generating Ultrasensitive Dose-Response Curves in Regulatory Networks
Francesco Ricci et al.
PLOS COMPUTATIONAL BIOLOGY (2011)
Molecular Beacons: Powerful Tools for Imaging RNA in Living Cells
Ricardo Monroy-Contreras et al.
JOURNAL OF NUCLEIC ACIDS (2011)
Folding-Based Electrochemical Biosensors: The Case for Responsive Nucleic Acid Architectures
Arica A. Lubin et al.
ACCOUNTS OF CHEMICAL RESEARCH (2010)
Conformational Switching of G-Quadruplex DNA by Photoregulation
Xiaolin Wang et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2010)
DNA as a Versatile Chemical Component for Catalysis, Encoding, and Stereocontrol
Scott K. Silverman
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2010)
DNA origami: a history and current perspective
Jeanette Nangreave et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2010)
Structure-switching biosensors: inspired by Nature
Alexis Vallee-Belisle et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2010)
Label-Free Detection of DNA Hybridization Using Surface Enhanced Raman Spectroscopy
Aoune Barhoumi et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2010)
Aptamer-Mediated Surface-Enhanced Raman Spectroscopy Intensity Amplification
Nam Hoon Kim et al.
NANO LETTERS (2010)
Molecular robots guided by prescriptive landscapes
Kyle Lund et al.
NATURE (2010)
Loading and selective release of cargo in DNA nanotubes with longitudinal variation
Pik Kwan Lo et al.
NATURE CHEMISTRY (2010)
Training a molecular automaton to play a game
Renjun Pei et al.
NATURE NANOTECHNOLOGY (2010)
Autonomous multistep organic synthesis in a single isothermal solution mediated by a DNA walker
Yu He et al.
NATURE NANOTECHNOLOGY (2010)
Highly Selective DNA-Based Sensor for Lead(II) and Mercury(II) Ions
Chi-Wei Liu et al.
ANALYTICAL CHEMISTRY (2009)
A Review: Electrochemical Aptasensors with Various Detection Strategies
Ying Xu et al.
ELECTROANALYSIS (2009)
The structural basis of allosteric regulation in proteins
Roman A. Laskowski et al.
FEBS LETTERS (2009)
A Biomimetic Potassium Responsive Nanochannel: G-Quadruplex DNA Conformational Switching in a Synthetic Nanopore
Xu Hou et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)
Protein sequestration generates a flexible ultrasensitive response in a genetic network
Nicolas E. Buchler et al.
MOLECULAR SYSTEMS BIOLOGY (2009)
Single-DNA Molecule Nanomotor Regulated by Photons
Huaizhi Kang et al.
NANO LETTERS (2009)
Self-assembly of a nanoscale DNA box with a controllable lid
Ebbe S. Andersen et al.
NATURE (2009)
The role of dynamic conformational ensembles in biomolecular recognition
David D. Boehr et al.
NATURE CHEMICAL BIOLOGY (2009)
Imaging intracellular RNA distribution and dynamics in living cells
Sanjay Tyagi
NATURE METHODS (2009)
A DNA nanomachine that maps spatial and temporal pH changes inside living cells
Souvik Modi et al.
NATURE NANOTECHNOLOGY (2009)
Thermodynamic basis for the optimization of binding-induced biomolecular switches and structure-switching biosensors
Alexis Vallee-Belisle et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Detection of mercury(II) based on Hg2+-DNA complexes inducing the aggregation of gold nanoparticles
Chi-Wei Liu et al.
CHEMICAL COMMUNICATIONS (2008)
Specific interactions between silver(I) ions and cytosine-cytosine pairs in DNA duplexes
Akira Ono et al.
CHEMICAL COMMUNICATIONS (2008)
Molecular Titration and Ultrasensitivity in Regulatory Networks
Nicolas E. Buchler et al.
JOURNAL OF MOLECULAR BIOLOGY (2008)
DNA aptamer folding on gold nanoparticles: From colloid chemistry to biosensors
Weian Zhao et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2008)
Aptamer switch probe based on intramolecular displacement
Zhiwen Tang et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2008)
Current Transients in Single Nanoparticle Collision Events
Xiaoyin Xiao et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2008)
A practical guide to single-molecule FRET
Rahul Roy et al.
NATURE METHODS (2008)
Aptamer-based biosensors
Shiping Song et al.
TRAC-TRENDS IN ANALYTICAL CHEMISTRY (2008)
Oligonucleotide loading determines cellular uptake of DNA-modified gold nanoparticles
David A. Giljohann et al.
NANO LETTERS (2007)
α,β-unsaturated 2-acyl imidazoles as a practical class of dienophiles for the DNA-Based catalytic asymmetric diels-alder reaction in water
Arnold J. Boersma et al.
ORGANIC LETTERS (2007)
DNA nanomachines
Jonathan Bath et al.
NATURE NANOTECHNOLOGY (2007)
Electronic aptamer-based sensors
Itamar Willner et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2007)
Appropriate calibration curve fitting in ligand binding assays
John W. A. Findlay et al.
AAPS JOURNAL (2007)
Direct observation of individual endogenous protein complexes in situ by proximity ligation
Ola Soderberg et al.
NATURE METHODS (2006)
Medium scale integration of molecular logic gates in an automaton
Joanne Macdonald et al.
NANO LETTERS (2006)
Label-free and reagentless aptamer-based sensors for small molecules
Maya Zayats et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2006)
An electronic, aptamer-based small-molecule sensor for the rapid, label-free detection of cocaine in adulterated samples and biological fluids
BR Baker et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2006)
MercuryII-mediated formation of thymine-HgII-thymine base pairs in DNA duplexes
Y Miyake et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2006)
Dynamics of single-cell gene expression
Diane Longo et al.
MOLECULAR SYSTEMS BIOLOGY (2006)
Nucleic acid aptamers and enzymes as sensors
Naveen K. Navani et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2006)
A reagentless signal-on architecture for electronic, aptamer-based sensors via target-induced strand displacement
Y Xiao et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2005)
Mechanism of mRNA transport in the nucleus
DY Vargas et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Aptamer-modified gold nanoparticles for colorimetric determination of platelet-derived growth factors and their receptors
CC Huang et al.
ANALYTICAL CHEMISTRY (2005)
Simultaneous monitoring of the expression of multiple genes inside of single breast carcinoma cells
CD Medley et al.
ANALYTICAL CHEMISTRY (2005)
Real-time detection of gene expression in cancer cells using molecular beacon imaging: New strategies for cancer research
XH Peng et al.
CANCER RESEARCH (2005)
Biosensors for protein detection: A review
B Leca-Bouvier et al.
ANALYTICAL LETTERS (2005)
Triggered amplification by hybridization chain reaction
RM Dirks et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Reprogramming DNA-directed reactions on the basis of a DNA conformational change
Y Chen et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2004)
A deoxyribozyme-based molecular automaton
MN Stojanovic et al.
NATURE BIOTECHNOLOGY (2003)
Electrochemical interrogation of conformational changes as a reagentless method for the sequence-specific detection of DNA
CH Fan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Mfold web server for nucleic acid folding and hybridization prediction
M Zuker
NUCLEIC ACIDS RESEARCH (2003)
Structure-switching signaling aptamers
R Nutiu et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)
The 3′-5′ exonucleases
IV Shevelev et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2002)
Aptamer beacons for the direct detection of proteins
N Hamaguchi et al.
ANALYTICAL BIOCHEMISTRY (2001)
Aptamer-based folding fluorescent sensor for cocaine
MN Stojanovic et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2001)