4.6 Review

Fluorescent Probes for Nucleic Acid Visualization in Fixed and Live Cells

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

RNA Traffic Lights: An Analytical Tool to Monitor siRNA Integrity

Carolin Holzhauser et al.

ACS CHEMICAL BIOLOGY (2013)

Article Chemistry, Multidisciplinary

Building Fluorescent DNA Nanodevices on Target Living Cell Surfaces

Guizhi Zhu et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2013)

Article Chemistry, Multidisciplinary

Detection of miRNA in Live Cells by Using Templated RuII-Catalyzed Unmasking of a Fluorophore

Kalyan K. Sadhu et al.

CHEMISTRY-A EUROPEAN JOURNAL (2013)

Review Cell Biology

Imaging cell biology in live animals: Ready for prime time

Roberto Weigert et al.

JOURNAL OF CELL BIOLOGY (2013)

Article Chemistry, Multidisciplinary

Development of a New Method for Synthesis of Tandem Hairpin Pyrrole-Imidazole Polyamide Probes Targeting Human Telomeres

Yusuke Kawamoto et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)

Article Chemistry, Multidisciplinary

A Targeted, Self-Delivered, and Photocontrolled Molecular Beacon for mRNA Detection in Living Cells

Liping Qiu et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)

Review Biochemistry & Molecular Biology

High-throughput sequencing for biology and medicine

Wendy Weijia Soon et al.

MOLECULAR SYSTEMS BIOLOGY (2013)

Article Chemistry, Multidisciplinary

Quantitative visualization of DNA G-quadruplex structures in human cells

Giulia Biffi et al.

NATURE CHEMISTRY (2013)

Article Biochemical Research Methods

Raman and SERS microscopy for molecular imaging of live cells

Almar F. Palonpon et al.

NATURE PROTOCOLS (2013)

Review Biochemical Research Methods

Recent trends in molecular beacon design and applications

Kewei Huang et al.

ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2012)

Review Biochemical Research Methods

Fluorescent hybridization probes for nucleic acid detection

Jia Guo et al.

ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2012)

Article Biochemical Research Methods

Fluorescence assay of polyamide-DNA interactions

Cynthia M. Dupureur et al.

ANALYTICAL BIOCHEMISTRY (2012)

Review Chemistry, Multidisciplinary

Nucleic Acid and Peptide Aptamers: Fundamentals and Bioanalytical Aspects

Marco Mascini et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2012)

Article Chemistry, Multidisciplinary

DNA Polyfluorophores for Real-Time Multicolor Tracking of Dynamic Biological Systems

Shenliang Wang et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2012)

Article Chemistry, Multidisciplinary

Consecutive Signal Amplification for DNA Detection Based on De Novo Fluorophore Synthesis and Host-Guest Chemistry

Xiao-Hua Chen et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2012)

Review Genetics & Heredity

RNA as a Structural and Regulatory Component of the Centromere

Jonathan I. Gent et al.

ANNUAL REVIEW OF GENETICS, VOL 46 (2012)

Review Biochemical Research Methods

Cellular Uptake and Intracellular Trafficking of Antisense and siRNA Oligonucleotides

Rudolph L. Juliano et al.

BIOCONJUGATE CHEMISTRY (2012)

Article Biochemical Research Methods

PNA FIT-Probes for the Dual Color Imaging of Two Viral mRNA Targets in Influenza H1N1 Infected Live Cells

Susann Kummer et al.

BIOCONJUGATE CHEMISTRY (2012)

Article Biochemistry & Molecular Biology

Quencher-free molecular beacon tethering 7-hydroxycoumarin detects targets through protonation/deprotonation

Hiromu Kashida et al.

BIOORGANIC & MEDICINAL CHEMISTRY (2012)

Article Biophysics

Label-Free Live-Cell Imaging with Confocal Raman Microscopy

Katharina Klein et al.

BIOPHYSICAL JOURNAL (2012)

Article Oncology

Single-dose pharmacokinetic and toxicity analysis of pyrrole-imidazole polyamides in mice

Timothy W. Synold et al.

CANCER CHEMOTHERAPY AND PHARMACOLOGY (2012)

Review Biochemistry & Molecular Biology

Progress and Prospects of Pyrrole-Imidazole Polyamide-Fluorophore Conjugates as Sequence-Selective DNA Probes

Thangavel Vaijayanthi et al.

CHEMBIOCHEM (2012)

Article Biochemistry & Molecular Biology

DNA Traffic Lights: Concept of Wavelength-Shifting DNA Probes and Application in an Aptasensor

Carolin Holzhauser et al.

CHEMBIOCHEM (2012)

Review Chemistry, Multidisciplinary

DNA-Multichromophore Systems

Yin Nah Teo et al.

CHEMICAL REVIEWS (2012)

Review Chemistry, Multidisciplinary

Combinatorial Strategies in Fluorescent Probe Development

Marc Vendrell et al.

CHEMICAL REVIEWS (2012)

Article Biochemistry & Molecular Biology

Pericentric and centromeric transcription: a perfect balance required

Laura E. Hall et al.

CHROMOSOME RESEARCH (2012)

Article Chemistry, Multidisciplinary

Pharmacokinetics of Py-Im Polyamides Depend on Architecture: Cyclic versus Linear

Jevgenij A. Raskatov et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)

Article Biochemistry & Molecular Biology

Mediator Promotes CENP-A Incorporation at Fission Yeast Centromeres

Jonas O. Carlsten et al.

MOLECULAR AND CELLULAR BIOLOGY (2012)

Article Multidisciplinary Sciences

In vivo genome editing using a high-efficiency TALEN system

Victoria M. Bedell et al.

NATURE (2012)

Article Multidisciplinary Sciences

An integrated encyclopedia of DNA elements in the human genome

Ian Dunham et al.

NATURE (2012)

Article Biochemical Research Methods

Visualising chromosomal replication sites and replicons in mammalian cells

Apolinar Maya-Mendoza et al.

METHODS (2012)

Article Biochemistry & Molecular Biology

Enhancing the cellular uptake of Py-Im polyamides through next-generation aryl turns

Jordan L. Meier et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemistry & Molecular Biology

Transcription in the maintenance of centromere chromatin identity

F. Lyn Chan et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Chemistry, Organic

Nucleic Acid Templated Uncaging of Fluorophores Using Ru-Catalyzed Photoreduction with Visible Light

Manuel Roethlingshoefer et al.

ORGANIC LETTERS (2012)

Article Multidisciplinary Sciences

Active transcription and essential role of RNA polymerase II at the centromere during mitosis

F. Lyn Chan et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Multidisciplinary Sciences

The Crystal Structure of TAL Effector PthXo1 Bound to Its DNA Target

Amanda Nga-Sze Mak et al.

SCIENCE (2012)

Review Biotechnology & Applied Microbiology

Genetic encoding of fluorescent RNA ensures a bright future for visualizing nucleic acid dynamics

Jason Dictenberg

TRENDS IN BIOTECHNOLOGY (2012)

Article Genetics & Heredity

Mediator regulates non-coding RNA transcription at fission yeast centromeres

Michael Thorsen et al.

EPIGENETICS & CHROMATIN (2012)

Article Nanoscience & Nanotechnology

Fluorescently Labeled Single-Walled Carbon Nanotubes and Their Hybrids with Oligonucleotides

E. K. Apartsin et al.

NANOTECHNOLOGIES IN RUSSIA (2012)

Review Chemistry, Analytical

Homogeneous assays using aptamers

Audrey Sassolas et al.

ANALYST (2011)

Article Chemistry, Multidisciplinary

Pyrene-Excimer Probes Based on the Hybridization Chain Reaction for the Detection of Nucleic Acids in Complex Biological Fluids

Jin Huang et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2011)

Article Chemistry, Multidisciplinary

Fluorescence Imaging of Influenza H1N1 mRNA in Living Infected Cells Using Single-Chromophore FIT-PNA

Susann Kummer et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2011)

Article Chemistry, Multidisciplinary

An Effective Minor Groove Binder as a Red Fluorescent Marker for Live-Cell DNA Imaging and Quantification

Xiaojun Peng et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2011)

Article Biochemical Research Methods

LNA for Optimization of Fluorescent Oligonucleotide Probes: Improved Spectral Properties and Target Binding

Irina V. Astakhova et al.

BIOCONJUGATE CHEMISTRY (2011)

Article Biochemistry & Molecular Biology

A Two-Color, Self-Controlled Molecular Beacon

Sarah M. Biner et al.

CHEMBIOCHEM (2011)

Review Biochemistry & Molecular Biology

Nucleic Acid Aptamers: Clinical Applications and Promising New Horizons

X. Ni et al.

CURRENT MEDICINAL CHEMISTRY (2011)

Review Pharmacology & Pharmacy

Making sense of therapeutics using antisense technology

Ravinder Malik et al.

EXPERT OPINION ON DRUG DISCOVERY (2011)

Article Chemistry, Multidisciplinary

Nucleic Acid-Templated Energy Transfer Leading to a Photorelease Reaction and its Application to a System Displaying a Nonlinear Response

Manuel Roethlingshoefer et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)

Article Biotechnology & Applied Microbiology

A TALE nuclease architecture for efficient genome editing

Jeffrey C. Miller et al.

NATURE BIOTECHNOLOGY (2011)

Article Biochemistry & Molecular Biology

Real time monitoring of endogenous cytoplasmic mRNA using linear antisense 2′-O-methyl RNA probes in living cells

Kohki Okabe et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Multidisciplinary Sciences

Multispectral labeling of antibodies with polyfluorophores on a DNA backbone and application in cellular imaging

Jia Guo et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

RNA Mimics of Green Fluorescent Protein

Jeremy S. Paige et al.

SCIENCE (2011)

Review Pharmacology & Pharmacy

Non-Viral Nucleic Acid Delivery: Key Challenges and Future Directions

Mahmoud Elsabahy et al.

CURRENT DRUG DELIVERY (2011)

Review Biochemistry & Molecular Biology

The Discovery of Zinc Fingers and Their Applications in Gene Regulation and Genome Manipulation

Aaron Klug

ANNUAL REVIEW OF BIOCHEMISTRY, VOL 79 (2010)

Review Biochemistry & Molecular Biology

Small-molecule regulators that mimic transcription factors

Jose A. Rodriguez-Martinez et al.

BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2010)

Article Biochemistry & Molecular Biology

Cell permeability of Py-Im-polyamide-fluorescein conjugates: Influence of molecular size and Py/Im content

Shigeki Nishijima et al.

BIOORGANIC & MEDICINAL CHEMISTRY (2010)

Article Biochemistry & Molecular Biology

Potent activity against K562 cells by polyamide-seco-CBI conjugates targeting histone H4 genes

Masafumi Minoshima et al.

BIOORGANIC & MEDICINAL CHEMISTRY (2010)

Article Chemistry, Multidisciplinary

Sandwich probes: two simultaneous reactions for templated nucleic acid detection

Daniel J. Kleinbaum et al.

CHEMICAL COMMUNICATIONS (2010)

Review Chemistry, Multidisciplinary

Binary Probes for Nucleic Acid Analysis

Dmitry M. Kolpashchikov

CHEMICAL REVIEWS (2010)

Article Chemistry, Organic

Synthesis and Optical Properties of Cyanine Dyes as Fluorescent DNA Base Substitutions for Live Cell Imaging

Carolin Holzhauser et al.

EUROPEAN JOURNAL OF ORGANIC CHEMISTRY (2010)

Article Genetics & Heredity

Targeting DNA Double-Strand Breaks with TAL Effector Nucleases

Michelle Christian et al.

GENETICS (2010)

Review Genetics & Heredity

Genome editing with engineered zinc finger nucleases

Fyodor D. Urnov et al.

NATURE REVIEWS GENETICS (2010)

Review Cell Biology

Telomeres: protecting chromosomes against genome instability

Roderick J. O'Sullivan et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2010)

Article Biochemistry & Molecular Biology

Slow non-specific accumulation of 2'-deoxy and 2'-O-methyl oligonucleotide probes at mitochondria in live cells

Won Jong Rhee et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemistry & Molecular Biology

Ratiometric bimolecular beacons for the sensitive detection of RNA in single living cells

Antony K. Chen et al.

NUCLEIC ACIDS RESEARCH (2010)

Review Biochemistry & Molecular Biology

Advances in Aptamers

Muhammad Ali Syed et al.

OLIGONUCLEOTIDES (2010)

Article Chemistry, Organic

Red-white-blue emission switching molecular beacons: ratiometric multicolour DNA hybridization probes

Reji Varghese et al.

ORGANIC & BIOMOLECULAR CHEMISTRY (2010)

Article Chemistry, Analytical

Locked Nucleic Acid Based Beacons for Surface Interaction Studies and Biosensor Development

Karen Martinez et al.

ANALYTICAL CHEMISTRY (2009)

Review Engineering, Biomedical

Fluorescent Probes for Live-Cell RNA Detection

Gang Bao et al.

ANNUAL REVIEW OF BIOMEDICAL ENGINEERING (2009)

Article Biochemical Research Methods

Hybridization-Sensitive Fluorescent Probe for Long-Term Monitoring of Intracellular RNA

Takeshi Kubota et al.

BIOCONJUGATE CHEMISTRY (2009)

Article Biophysics

Fluorophore Binding Aptamers as a Tool for RNA Visualization

Katja Eydeler et al.

BIOPHYSICAL JOURNAL (2009)

Article Biotechnology & Applied Microbiology

Simultaneous detection of mRNA and protein stem cell markers in live cells

Won Jong Rhee et al.

BMC BIOTECHNOLOGY (2009)

Review Biochemistry & Molecular Biology

Evolution and Functions of Long Noncoding RNAs

Chris P. Ponting et al.

Review Biochemistry & Molecular Biology

Radiolabelled Oligonucleotides for Imaging of Gene Expression with PET

G. Lendvai et al.

CURRENT MEDICINAL CHEMISTRY (2009)

Article Cell Biology

Satellite DNA Spatial Localization and Transcriptional Activity in Mouse Embryonic E-14 and IOUD2 Stem Cells

N. I. Enukashvily et al.

CYTOGENETIC AND GENOME RESEARCH (2009)

Article Biochemical Research Methods

Controlled Light Exposure Microscopy Reveals Dynamic Telomere Microterritories Throughout the Cell Cycle

Winnok H. De Vos et al.

CYTOMETRY PART A (2009)

Article Chemistry, Medicinal

Modifications at the C-Terminus To Improve Pyrrole-Imidazole Polyamide Activity in Cell Culture

Claire S. Jacobs et al.

JOURNAL OF MEDICINAL CHEMISTRY (2009)

Article Chemistry, Multidisciplinary

Solution-Phase Synthesis of Pyrrole-Imidazole Polyamides

David M. Chenoweth et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)

Article Chemistry, Multidisciplinary

Efficient Nucleic Acid Detection by Templated Reductive Quencher Release

Raphael M. Franzini et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)

Article Chemistry, Multidisciplinary

Polyfluorophores on a DNA Backbone: A Multicolor Set of Labels Excited at One Wavelength

Yin Nah Teo et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)

Article Biochemistry & Molecular Biology

Selective molecular imaging of viable cancer cells with pH-activatable fluorescence probes

Yasuteru Urano et al.

NATURE MEDICINE (2009)

Review Biochemical Research Methods

Imaging intracellular RNA distribution and dynamics in living cells

Sanjay Tyagi

NATURE METHODS (2009)

Article Biochemistry & Molecular Biology

Sub-cellular trafficking and functionality of 2'-O-methyl and 2'-O-methyl-phosphorothioate molecular beacons

Antony K. Chen et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Multidisciplinary Sciences

Breaking the Code of DNA Binding Specificity of TAL-Type III Effectors

Jens Boch et al.

SCIENCE (2009)

Review Chemistry, Multidisciplinary

Functionalized carbon nanotubes in drug design and discovery

Maurizio Prato et al.

ACCOUNTS OF CHEMICAL RESEARCH (2008)

Editorial Material Biochemical Research Methods

A novel kinase-based ATP assay using molecular beacon

Changbei Ma et al.

ANALYTICAL BIOCHEMISTRY (2008)

Article Chemistry, Multidisciplinary

Target-catalyzed transfer reactions for the amplified detection of RNA

Tom N. Grossmann et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2008)

Article Biochemistry & Molecular Biology

Visualizing genetic loci and molecular machines in living bacteria

Xindan Wang et al.

BIOCHEMICAL SOCIETY TRANSACTIONS (2008)

Article Biochemistry & Molecular Biology

Perylene-conjugated pyrrole polyamide as a sequence-specific fluorescent probe

Jun Fujimoto et al.

BIOORGANIC & MEDICINAL CHEMISTRY (2008)

Article Biochemistry & Molecular Biology

New, stronger nucleophiles for nucleic acid-templated chemistry: Synthesis and application in fluorescence detection of cellular RNA

Gregory P. Miller et al.

BIOORGANIC & MEDICINAL CHEMISTRY (2008)

Article Biochemistry & Molecular Biology

Bis-pyrene-labeled molecular beacon: A monomer-excimer switching probe for the detection of DNA base alteration

Kazushige Yamana et al.

BIOORGANIC & MEDICINAL CHEMISTRY (2008)

Article Chemistry, Medicinal

Quantitating the concentration of Py-Im polyamide-fluorescein conjugates in live cells

Carey F. Hsu et al.

BIOORGANIC & MEDICINAL CHEMISTRY LETTERS (2008)

Article Biotechnology & Applied Microbiology

Symmetric cyanine dyes for detecting nucleic acids

S. M. Yarmoluk et al.

BIOTECHNIC & HISTOCHEMISTRY (2008)

Article Biochemistry & Molecular Biology

Triplex formation by pyrene-labelled probes for nucleic acid detection in fluorescence assays

Ineke Van Daele et al.

CHEMBIOCHEM (2008)

Article Biochemical Research Methods

Cyanine dyes for the detection of double stranded DNA

H. Hilal et al.

JOURNAL OF BIOCHEMICAL AND BIOPHYSICAL METHODS (2008)

Article Cell Biology

Centromere mitotic recombination in mammalian cells

Isabel Jaco et al.

JOURNAL OF CELL BIOLOGY (2008)

Article Chemistry, Physical

Carbon nanotube cell translocation and delivery of nucleic acids in vitro and in vivo

Lara Lacerda et al.

JOURNAL OF MATERIALS CHEMISTRY (2008)

Article Chemistry, Organic

Thiazole orange and Cy3: Improvement of fluorescent DNA probes with use of short range electron transfer

Florian Menacher et al.

JOURNAL OF ORGANIC CHEMISTRY (2008)

Article Chemistry, Multidisciplinary

Microwave-induced multiple functionalization of carbon nanotubes

Fulvio G. Brunetti et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2008)

Article Chemistry, Multidisciplinary

Facile decoration of functionalized single-wall carbon nanotubes with phthalocyanines via Click Chemistry

Stephane Campidelli et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2008)

Article Chemistry, Multidisciplinary

Two color RNA intercalating probe for cell imaging applications

Nathan Stevens et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2008)

Article Biotechnology & Applied Microbiology

Construction of three quadruple-fluorescent MDA435 cell lines that enable monitoring of the whole chromosome segregation process in the living state

Kenji Sugimoto et al.

MUTATION RESEARCH-GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS (2008)

Review Cell Biology

Fluorescent probes for super-resolution imaging in living cells

Marta Fernandez-Suarez et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2008)

Review Biochemistry & Molecular Biology

The triple helix: 50 years later, the outcome

Maria Duca et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Multidisciplinary Sciences

In vivo imaging of pyrrole-imidazole polyamides with positron emission tomography

Daniel A. Harki et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Biochemistry & Molecular Biology

Superior structure stability and selectivity of hairpin nucleic acid probes with an L-DNA stem

Youngmi Kim et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemistry & Molecular Biology

Detection of CAG repeat DNA sequences by pyrene-functionalized pyrrole-imidazole polyamides

Toshikazu Bando et al.

BIOORGANIC & MEDICINAL CHEMISTRY (2007)

Article Biochemistry & Molecular Biology

α-diaminobutyric acid-linked hairpin polyamides

Michelle E. Farkas et al.

BIOORGANIC & MEDICINAL CHEMISTRY (2007)

Article Biochemistry & Molecular Biology

Real-time monitoring of nucleic acid dephosphorylation by using molecular beacons

Changbei Ma et al.

CHEMBIOCHEM (2007)

Article Biochemistry & Molecular Biology

Quantitative labeling of long plasmid DNA with nanometer precision

Goran Pljevaljcic et al.

CHEMBIOCHEM (2007)

Article Biochemistry & Molecular Biology

Live cell imaging of repetitive DNA sequences via GFP-tagged polydactyl zinc finger proteins

Beatrice I. Lindhout et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Multidisciplinary Sciences

Suppression of androgen receptor-mediated gene expression by a sequence-specific DNA-binding polyamide

Nicholas G. Nickols et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemical Research Methods

Comparison of triple helical COMBO-FISH and standard FISH by means of quantitative microscopic image analysis of abl/bcr positions in cell nuclei

Jutta Schwarz-Finsterle et al.

JOURNAL OF BIOCHEMICAL AND BIOPHYSICAL METHODS (2007)

Article Chemistry, Multidisciplinary

Fluorescent sequence-specific dsDNA binding oligomers

David M. Chenoweth et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2007)

Article Chemistry, Analytical

Hairpin fluorescence DNA probe for real-time monitoring of DNA methylation

Jun Li et al.

ANALYTICAL CHEMISTRY (2007)

Review Biochemistry & Molecular Biology

MicroRNA: past and present

Yang Wang et al.

FRONTIERS IN BIOSCIENCE-LANDMARK (2007)

Article Biochemistry & Molecular Biology

Improved nuclear localization of DNA-binding polyamides

Nicholas G. Nickols et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemistry & Molecular Biology

Synthesis and investigation of deoxyribonucleic acid/locked nucleic acid chimeric molecular beacons

Chaoyong James Yang et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Chemistry, Multidisciplinary

DNA-catalyzed transfer of a reporter group

Tom N. Grossmann et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2006)

Review Biochemical Research Methods

Targeting the human genome

Kiyoshi Tachikawa et al.

CURRENT OPINION IN BIOTECHNOLOGY (2006)

Review Biochemistry & Molecular Biology

Direct detection of double-stranded DNA: molecular methods and applications for DNA diagnostics

Indraneel Ghosh et al.

MOLECULAR BIOSYSTEMS (2006)

Article Chemistry, Multidisciplinary

Hybrid molecular probe for nucleic acid analysis in biological samples

Chaoyong James Yang et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2006)

Article Multidisciplinary Sciences

DNA sequence-specific polyamides alleviate transcription inhibition associated with long GAA•TTC repeats in Friedreich's ataxia

Ryan Burnett et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Multidisciplinary Sciences

Accumulation of small murine minor satellite transcripts leads to impaired centromeric architecture and function

Haniaa Bouzinba-Segard et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Review Biochemical Research Methods

Advances in fluorescent tracking of nucleic acids in living cells

RW Dirks et al.

BIOTECHNIQUES (2006)

Article Multidisciplinary Sciences

Flow cytometric detection of specific RNAs in native human cells with quenched autoligating FRET probes

H Abe et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemistry & Molecular Biology

Pyrene binary probes for unambiguous detection of mRNA using time-resolved fluorescence spectroscopy

Angel A. Marti et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Chemistry, Multidisciplinary

High thermal stability of 5 '-5 '-linked alternate Hoogsteen triplexes at physiological pH

Vyacheslav V. Filichev et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2006)

Article Chemistry, Multidisciplinary

Sequence-specific fluorescence detection of DNA by polyamide-thiazole orange conjugates

EJ Fechter et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2005)

Article Chemistry, Multidisciplinary

Locked nucleic acid molecular beacons

L Wang et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2005)

Article Biochemistry & Molecular Biology

Dramatically improved RNA in situ hybridization signals using LNA-modified probes

R Thomsen et al.

Article Chemistry, Multidisciplinary

Binary malachite green aptamer for fluorescent detection of nucleic acids

DM Kolpashchikov

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2005)

Article Multidisciplinary Sciences

The transcriptional landscape of the mammalian genome

P Carninci et al.

SCIENCE (2005)

Article Biochemical Research Methods

DNA labeling in living cells

RM Martin et al.

CYTOMETRY PART A (2005)

Article Chemistry, Medicinal

Functionalized head-to-head hairpin polyamides: Synthesis, double-stranded DNA-binding activity and affinity

L Halby et al.

BIOORGANIC & MEDICINAL CHEMISTRY LETTERS (2005)

Article Chemistry, Analytical

Using molecular beacon to monitor activity of E-coli DNA ligase

LF Liu et al.

ANALYST (2005)

Article Biochemistry & Molecular Biology

3 '-modified oligo(2 '-O-methylribonucleotides) as improved probes for hybridization with RNA

DS Novopashina et al.

NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS (2005)

Article Biochemistry & Molecular Biology

Real-time investigation of nucleic acids phosphorylation process using molecular beacons

ZW Tang et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemistry & Molecular Biology

Quenched autoligation probes allow discrimination of live bacterial species by single nucleotide differences in rRNA

AP Silverman et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemical Research Methods

Short PNA molecular beacons for real-time PCR allelic discrimination of single nucleotide polymorphisms

K Petersen et al.

MOLECULAR AND CELLULAR PROBES (2004)

Review Biochemistry & Molecular Biology

The peptide nucleic acids (PNAs), powerful tools for molecular genetics and cytogenetics

F Pellestor et al.

EUROPEAN JOURNAL OF HUMAN GENETICS (2004)

Review Pharmacology & Pharmacy

Drug delivery of oligonucleotides by peptides

D Lochmann et al.

EUROPEAN JOURNAL OF PHARMACEUTICS AND BIOPHARMACEUTICS (2004)

Review Biotechnology & Applied Microbiology

Regulation of gene expression with pyrrole-imidazole polyamides

C Melander et al.

JOURNAL OF BIOTECHNOLOGY (2004)

Article Chemistry, Multidisciplinary

Expanding the repertoire of heterocycle ring pairs for programmable minor groove DNA recognition

MA Marques et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2004)

Article Cell Biology

LNA-modified oligonucleotides are highly efficient as FISH probes

A Silahtaroglu et al.

CYTOGENETIC AND GENOME RESEARCH (2004)

Article Chemistry, Multidisciplinary

Destabilizing universal linkers for signal amplification in self-ligating probes for RNA

H Abe et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2004)

Article Biochemistry & Molecular Biology

Arresting cancer proliferation by small-molecule gene regulation

LA Dickinson et al.

CHEMISTRY & BIOLOGY (2004)

Review Biochemistry & Molecular Biology

Molecular beacons

WH Tan et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2004)

Article Chemistry, Organic

Unambiguous detection of target DNAs by excimer-monomer switching molecular beacons

K Fujimoto et al.

JOURNAL OF ORGANIC CHEMISTRY (2004)

Article Biochemistry & Molecular Biology

Visualizing telomere dynamics in living mammalian cells using PNA probes

C Molenaar et al.

EMBO JOURNAL (2003)

Article Multidisciplinary Sciences

Visualizing the distribution and transport of mRNAs in living cells

DP Bratu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Article Biochemistry & Molecular Biology

Accessibility of nuclear chromatin by DNA binding polyamides

B Dudouet et al.

CHEMISTRY & BIOLOGY (2003)

Article Biochemical Research Methods

FISHing with locked nucleic acids (LNA): evaluation of different LNA/DNA mixmers

AN Silahtaroglu et al.

MOLECULAR AND CELLULAR PROBES (2003)

Article Chemistry, Multidisciplinary

U-pin polyamide motif for recognition of the DNA minor groove

A Heckel et al.

CHEMISTRY-A EUROPEAN JOURNAL (2003)

Article Cell Biology

Fluorescence in situ hybridization: past, present and future

JM Levsky et al.

JOURNAL OF CELL SCIENCE (2003)

Review Biochemistry & Molecular Biology

Recognition of the DNA minor groove by pyrrole-imidazole polyamides

PB Dervan et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2003)

Review Multidisciplinary Sciences

Development and use of fluorescent protein markers in living cells

J Lippincott-Schwartz et al.

SCIENCE (2003)

Article Biotechnology & Applied Microbiology

Targeted delivery of DNA to the mitochondrial compartment via import sequence-conjugated peptide nucleic acid

A Flierl et al.

MOLECULAR THERAPY (2003)

Article Chemistry, Multidisciplinary

Design of a new fluorescent cofactor for DNA methyltransferases and sequence-specific labeling of DNA

G Pljevaljcic et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)

Article Biochemistry & Molecular Biology

Hybridization kinetics and thermodynamics of molecular beacons

A Tsourkas et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Chemistry, Multidisciplinary

Sequence specific fluorescence detection of double strand DNA

VC Rucker et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)

Article Chemistry, Multidisciplinary

Thiazole orange as fluorescent universal base in peptide nucleic acids

O Kohler et al.

CHEMICAL COMMUNICATIONS (2003)

Article Biochemistry & Molecular Biology

Real-time monitoring of nucleic acid ligation in homogenous solutions using molecular beacons

ZW Tang et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Biochemical Research Methods

Visualizing RNA molecules inside the nucleus of living cells

RW Dirks et al.

METHODS (2003)

Article Biochemistry & Molecular Biology

Hybridization of 2′-O-methyl and 2′-deoxy molecular beacons to RNA and DNA targets

A Tsourkas et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Biochemistry & Molecular Biology

Structure-function relationships of shared-stem and conventional molecular beacons

A Tsourkas et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Biochemistry & Molecular Biology

Search for the optimal linker in tandem hairpin polyamides

I Kers et al.

BIOORGANIC & MEDICINAL CHEMISTRY (2002)

Article Chemistry, Multidisciplinary

Imaging of RNA in bacteria with self-ligating quenched probes

S Sando et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2002)

Article Chemistry, Medicinal

Rapid solid-phase synthesis of DNA-binding pyrrole-imidazole polyamides

PO Krutzik et al.

BIOORGANIC & MEDICINAL CHEMISTRY LETTERS (2002)

Review Biophysics

Triplex-forming oligonucleotides: principles and applications

KM Vasquez et al.

QUARTERLY REVIEWS OF BIOPHYSICS (2002)

Review Medical Laboratory Technology

Stains, labels and detection strategies for nucleic acids assays

LJ Kricka

ANNALS OF CLINICAL BIOCHEMISTRY (2002)

Review Biochemistry & Molecular Biology

Recognition of specific DNA sequences

CW Garvie et al.

MOLECULAR CELL (2001)

Review Biochemistry & Molecular Biology

Triplex forming oligonucleotides: sequence-specific tools for gene targeting

MP Knauert et al.

HUMAN MOLECULAR GENETICS (2001)

Article Biochemistry & Molecular Biology

Linear 2′ O-Methyl RNA probes for the visualization of RNA in living cells

C Molenaar et al.

NUCLEIC ACIDS RESEARCH (2001)

Review Biochemistry & Molecular Biology

Molecular recognition of DNA by small molecules

PB Dervan

BIOORGANIC & MEDICINAL CHEMISTRY (2001)

Article Chemistry, Multidisciplinary

Linear fluorescent oligonucleotide probes with an acridine quencher generate a signal upon hybridisation

RT Ranasinghe et al.

CHEMICAL COMMUNICATIONS (2001)

Review Biotechnology & Applied Microbiology

Triplex-forming molecules: from concepts to applications

M Faria et al.

JOURNAL OF GENE MEDICINE (2001)

Article Biochemistry & Molecular Biology

Specific targeting of insect and vertebrate telomeres with pyrrole and imidazole polyamides

K Maeshima et al.

EMBO JOURNAL (2001)

Article Chemistry, Multidisciplinary

Free-probe fluorescence of light-up probes

N Svanvik et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2001)

Article Biochemistry & Molecular Biology

2 '-O-modified oligoribonucleotides with terminal 3 '-3 '-internucleotide linkage and their derivatives

D Novopashina et al.

NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS (2001)

Review Biochemistry & Molecular Biology

Gene targeting via triple-helix formation

BP Casey et al.

PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 67 (2001)

Review Biotechnology & Applied Microbiology

A review of fluorescence in situ hybridization (FISH): Current status and future prospects

J Nath et al.

BIOTECHNIC & HISTOCHEMISTRY (2000)

Review Biochemistry & Molecular Biology

Targeting DNA with triplexes

KR Fox

CURRENT MEDICINAL CHEMISTRY (2000)

Review Oncology

Telomeres, telomerase, and cancer: life on the edge of genomic stability

R Oulton et al.

CURRENT OPINION IN ONCOLOGY (2000)