4.7 Article

Environmental metabarcodes for insects: in silico PCR reveals potential for taxonomic bias

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Modular tagging of amplicons using a single PCR for high-throughput sequencing

Laurence J. Clarke et al.

MOLECULAR ECOLOGY RESOURCES (2014)

Article Soil Science

Illumina metabarcoding of a soil fungal community

Philipp-Andre Schmidt et al.

SOIL BIOLOGY & BIOCHEMISTRY (2013)

Article Biochemistry & Molecular Biology

Plant species richness belowground: higher richness and new patterns revealed by next-generation sequencing

Inga Hiiesalu et al.

MOLECULAR ECOLOGY (2012)

Article Biochemistry & Molecular Biology

Monitoring endangered freshwater biodiversity using environmental DNA

Philip Francis Thomsen et al.

MOLECULAR ECOLOGY (2012)

Review Biochemistry & Molecular Biology

Who is eating what: diet assessment using next generation sequencing

Francois Pompanon et al.

MOLECULAR ECOLOGY (2012)

Article Biochemistry & Molecular Biology

DNA from soil mirrors plant taxonomic and growth form diversity

N. G. Yoccoz et al.

MOLECULAR ECOLOGY (2012)

Article Biochemistry & Molecular Biology

New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems

Laura S. Epp et al.

MOLECULAR ECOLOGY (2012)

Article Biochemistry & Molecular Biology

A universal method for the detection and identification of Aphidiinae parasitoids within their aphid hosts

Stephane A. P. Derocles et al.

MOLECULAR ECOLOGY RESOURCES (2012)

Article Multidisciplinary Sciences

The widely used small subunit 18S rDNA molecule greatly underestimates true diversity in biodiversity surveys of the meiofauna

Cuong Q. Tang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Ecology

Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring

Douglas W. Yu et al.

METHODS IN ECOLOGY AND EVOLUTION (2012)

Article Biochemistry & Molecular Biology

Taxon-specific PCR for DNA barcoding arthropod prey in bat faeces

Matt R. K. Zeale et al.

MOLECULAR ECOLOGY RESOURCES (2011)

Article Biochemistry & Molecular Biology

ecoPrimers: inference of new DNA barcode markers from whole genome sequence analysis

Tiayyba Riaz et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemical Research Methods

Search and clustering orders of magnitude faster than BLAST

Robert C. Edgar

BIOINFORMATICS (2010)

Article Biotechnology & Applied Microbiology

An In silico approach for the evaluation of DNA barcodes

Gentile Francesco Ficetola et al.

BMC GENOMICS (2010)

Article Biochemistry & Molecular Biology

Assessment of loci for DNA barcoding in the genus Thrips (Thysanoptera:Thripidae)

R. H. Glover et al.

MOLECULAR ECOLOGY RESOURCES (2010)

Article Biochemistry & Molecular Biology

Recovering full DNA barcodes from natural history collections of Tephritid fruitflies (Tephritidae, Diptera) using mini barcodes

J. K. J. Van Houdt et al.

MOLECULAR ECOLOGY RESOURCES (2010)

Article Biochemistry & Molecular Biology

Using next-generation sequencing for molecular reconstruction of past Arctic vegetation and climate

J. H. Sonstebo et al.

MOLECULAR ECOLOGY RESOURCES (2010)

Article Multidisciplinary Sciences

Increased Throughput by Parallelization of Library Preparation for Massive Sequencing

Sverker Lundin et al.

PLOS ONE (2010)

Article Multidisciplinary Sciences

Non-Destructive Sampling of Ancient Insect DNA

Philip Francis Thomsen et al.

PLOS ONE (2009)

Article Multidisciplinary Sciences

Ancient DNA reveals late survival of mammoth and horse in interior Alaska

James Haile et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Evolutionary Biology

Evolution of the Neotropical ant genus Linepithema

Alexander L. Wild

SYSTEMATIC ENTOMOLOGY (2009)

Article Biotechnology & Applied Microbiology

A universal DNA mini-barcode for biodiversity analysis

Isabelle Meusnier et al.

BMC GENOMICS (2008)

Article Multidisciplinary Sciences

Extreme diversity of tropical parasitoid wasps exposed by iterative integration of natural history, DNA barcoding, morphology, and collections

M. Alex Smith et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

Ancient biomolecules from deep ice cores reveal a forested Southern Greenland

Eske Willerslev et al.

SCIENCE (2007)

Article Biochemistry & Molecular Biology

BOLD: The Barcode of Life Data System (www.barcodinglife.org)

Sujeevan Ratnasingham et al.

MOLECULAR ECOLOGY NOTES (2007)

Article Biochemistry & Molecular Biology

An inexpensive, automation-friendly protocol for recovering high-quality DNA

Natalia V. Ivanova et al.

MOLECULAR ECOLOGY NOTES (2006)

Article Biology

Biological identifications through DNA barcodes

PDN Hebert et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2003)

Article Biochemistry & Molecular Biology

Extreme length and length variation in the first ribosomal internal transcribed spacer of ladybird beetles (Coleoptera: Coccinellidae)

JHGV Schulenburg et al.

MOLECULAR BIOLOGY AND EVOLUTION (2001)