Journal
MOLECULAR CELL
Volume 46, Issue 5, Pages 606-615Publisher
CELL PRESS
DOI: 10.1016/j.molcel.2012.03.020
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Funding
- National Science Foundation
- Damon Runyon Cancer Research Foundation
- Direct For Biological Sciences
- Div Of Molecular and Cellular Bioscience [950971] Funding Source: National Science Foundation
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In bacterial and archaeal CRISPR immune pathways, DNA sequences from invading bacteriophage or plasmids are integrated into CRISPR loci within the host genome, conferring immunity against subsequent infections. The ribonucleoprotein complex Cascade utilizes RNAs generated from these loci to target complementary nonself DNA sequences for destruction, while avoiding binding to self sequences within the CRISPR locus. Here we show that CasA, the largest protein subunit of Cascade, is required for nonself target recognition and binding. Combining a 2.3 angstrom crystal structure of CasA with cryo-EM structures of Cascade, we have identified a loop that is required for viral defense. This loop contacts a conserved three base pair motif that is required for nonself target selection. Our data suggest a model in which the CasA loop scans DNA for this short motif prior to target destabilization and binding, maximizing the efficiency of DNA surveillance by Cascade.
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