Related references
Note: Only part of the references are listed.MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
Fredrik Ronquist et al.
SYSTEMATIC BIOLOGY (2012)
Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi
Robin A. Ohm et al.
PLOS PATHOGENS (2012)
Plant-Parasite Coevolution: Bridging the Gap between Genetics and Ecology
James K. M. Brown et al.
ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 49 (2011)
The making of a new pathogen: Insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species
Eva H. Stukenbrock et al.
GENOME RESEARCH (2011)
When and how to kill a plant cell: Infection strategies of plant pathogenic fungi
Ralf Horbach et al.
JOURNAL OF PLANT PHYSIOLOGY (2011)
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
Koichiro Tamura et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
Evolutionary history of the mitochondrial genome in Mycosphaerella populations infecting bread wheat, durum wheat and wild grasses
Stefano F. F. Torriani et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2011)
Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
Stephen B. Goodwin et al.
PLOS GENETICS (2011)
Improving RNA-Seq expression estimates by correcting for fragment bias
Adam Roberts et al.
GENOME BIOLOGY (2011)
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Cole Trapnell et al.
NATURE BIOTECHNOLOGY (2010)
TopHat: discovering splice junctions with RNA-Seq
Cole Trapnell et al.
BIOINFORMATICS (2009)
Plant cell walls throughout evolution: towards a molecular understanding of their design principles
Purbasha Sarkar et al.
JOURNAL OF EXPERIMENTAL BOTANY (2009)
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics
Brandi L. Cantarel et al.
NUCLEIC ACIDS RESEARCH (2009)
Wheat Domestication Accelerated Evolution and Triggered Positive Selection in the β-Xylosidase Enzyme of Mycosphaerella graminicola
Patrick C. Brunner et al.
PLOS ONE (2009)
Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing
Ryan D. Morin et al.
BIOTECHNIQUES (2008)
jModelTest: Phylogenetic model averaging
David Posada
MOLECULAR BIOLOGY AND EVOLUTION (2008)
Comparative genomics and the study of evolution by natural selection
Hans Ellegren
MOLECULAR ECOLOGY (2008)
Mapping and quantifying mammalian transcriptomes by RNA-Seq
Ali Mortazavi et al.
NATURE METHODS (2008)
Natural history and evolutionary principles of gene duplication in fungi
Ilan Wapinski et al.
NATURE (2007)
Geographical variation and positive diversifying selection in the host-specific toxin SnToxA
Eva H. Stukenbrock et al.
MOLECULAR PLANT PATHOLOGY (2007)
Correlative analysis of Mycosphaerella graminicola pathogenicity and cell wall-degrading enzymes produced in vitro:: the importance of xylanase and polygalacturonase
M. -N. Douaiher et al.
PLANT PATHOLOGY (2007)
Reconstructing the early evolution of Fungi using a six-gene phylogeny
Timothy Y. James et al.
NATURE (2006)
Plant protein inhibitors of cell wall degrading enzymes
Nathalie Juge
TRENDS IN PLANT SCIENCE (2006)
Polygalacturonase inhibiting proteins: players in plant innate immunity?
L Federici et al.
TRENDS IN PLANT SCIENCE (2006)
Characterization of human immunodeficiency virus type 1 (HIV-1) envelope variation and neutralizing antibody responses during transmission of HIV-1 subtype B
SDW Frost et al.
JOURNAL OF VIROLOGY (2005)
HyPhy: hypothesis testing using phylogenies
SLK Pond et al.
BIOINFORMATICS (2005)
MAFFT version 5: improvement in accuracy of multiple sequence alignment
K Katoh et al.
NUCLEIC ACIDS RESEARCH (2005)
Cloning and targeted disruption, via Agrobacterium tumefaciens-mediated transformation, of a trypsin protease gene from the vascular wilt fungus Verticillium dahliae
KF Dobinson et al.
CURRENT GENETICS (2004)
Molecular population genetic analysis differentiates two virulence mechanisms of the fungal avirulence gene NIP1
S Schürch et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2004)
Discovery of gene function by expression profiling of the malaria parasite life cycle
KG Le Roch et al.
SCIENCE (2003)
Haplotype variation in bovine Toll-like receptor 4 and computational prediction of a positively selected ligand-binding domain
SN White et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
The power and promise of population genomics: From genotyping to genome typing
G Luikart et al.
NATURE REVIEWS GENETICS (2003)
Role in pathogenesis of two endo-β-1,4-xylanase genes from the vascular wilt fungus Fusarium oxysporum
E Gómez-Gómez et al.
FUNGAL GENETICS AND BIOLOGY (2002)
Pathogenicity genes of phytopathogenic fungi
Alexander Idnurm et al.
MOLECULAR PLANT PATHOLOGY (2001)
The evolutionary fate and consequences of duplicate genes
M Lynch et al.
SCIENCE (2000)
Cloning and disruption of pgx4 encoding an in planta expressed exopolygalacturonase from Fusarium oxysporum
FI García-Maceira et al.
MOLECULAR PLANT-MICROBE INTERACTIONS (2000)
Cell wall degrading enzymes, inhibitory proteins, and oligosaccharides participate in the molecular dialogue between plants and pathogens
MT Esquerre-Tugaye et al.
PLANT PHYSIOLOGY AND BIOCHEMISTRY (2000)