Related references
Note: Only part of the references are listed.The One Hour Yeast Proteome
Alexander S. Hebert et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
Targeted Peptide Measurements in Biology and Medicine: Best Practices for Mass Spectrometry- based Assay Development Using a Fit- for- Purpose Approach
Steven A. Carr et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
Characterization of a high field Orbitrap mass spectrometer for proteome analysis
Fiona Pachl et al.
PROTEOMICS (2013)
Consecutive Proteolytic Digestion in an Enzyme Reactor Increases Depth of Proteomic and Phosphoproteomic Analysis
Jacek R. Wisniewski et al.
ANALYTICAL CHEMISTRY (2012)
Large-Scale Quantitative Assessment of Different In-Solution Protein Digestion Protocols Reveals Superior Cleavage Efficiency of Tandem Lys-C/Trypsin Proteolysis over Trypsin Digestion
Timo Glatter et al.
JOURNAL OF PROTEOME RESEARCH (2012)
Reorganizing the protein space at the Universal Protein Resource (UniProt)
Rolf Apweiler et al.
NUCLEIC ACIDS RESEARCH (2012)
Range of protein detection by selected/multiple reaction monitoring mass spectrometry in an unfractionated human cell culture lysate
H. Alexander Ebhardt et al.
PROTEOMICS (2012)
100% protein sequence coverage: a modern form of surrealism in proteomics
Bjoern Meyer et al.
AMINO ACIDS (2011)
Deep proteome and transcriptome mapping of a human cancer cell line
Nagarjuna Nagaraj et al.
MOLECULAR SYSTEMS BIOLOGY (2011)
Rapid empirical discovery of optimal peptides for targeted proteomics
Andrew B. Stergachis et al.
NATURE METHODS (2011)
CPFP: a central proteomics facilities pipeline
David C. Trudgian et al.
BIOINFORMATICS (2010)
Skyline: an open source document editor for creating and analyzing targeted proteomics experiments
Brendan MacLean et al.
BIOINFORMATICS (2010)
Efficient Marginalization to Compute Protein Posterior Probabilities from Shotgun Mass Spectrometry Data
Oliver Serang et al.
JOURNAL OF PROTEOME RESEARCH (2010)
Value of Using Multiple Proteases for Large-Scale Mass Spectrometry-Based Proteomics
Danielle L. Swaney et al.
JOURNAL OF PROTEOME RESEARCH (2010)
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
Eran Eden et al.
BMC BIOINFORMATICS (2009)
A Bayesian Approach to Protein Inference Problem in Shotgun Proteomics
Yong Fuga Li et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2009)
Combination of FASP and StageTip-Based Fractionation Allows In-Depth Analysis of the Hippocampal Membrane Proteome
Jacek R. Wisniewski et al.
JOURNAL OF PROTEOME RESEARCH (2009)
Elastase Digests NEW AMMUNITION FOR SHOTGUN MEMBRANE PROTEOMICS
Benjamin Rietschel et al.
MOLECULAR & CELLULAR PROTEOMICS (2009)
Protein Identification False Discovery Rates for Very Large Proteomics Data Sets Generated by Tandem Mass Spectrometry
Lukas Reiter et al.
MOLECULAR & CELLULAR PROTEOMICS (2009)
Decision tree-driven tandem mass spectrometry for shotgun proteomics
Danielle L. Swaney et al.
NATURE METHODS (2008)
Proteomic parsimony through bipartite graph analysis improves accuracy and transparency
Bing Zhang et al.
JOURNAL OF PROTEOME RESEARCH (2007)
MyriMatch: Highly accurate tandem mass spectral peptide identification by multivariate hypergeometric analysis
David L. Tabb et al.
JOURNAL OF PROTEOME RESEARCH (2007)
Prediction of peptides observable by mass spectrometry applied at the experimental set level
William S. Sanders et al.
BMC BIOINFORMATICS (2007)
The PeptideAtlas project
Frank Desiere et al.
NUCLEIC ACIDS RESEARCH (2006)
Mass spectrometric quantitation of peptides and proteins using stable isotope standards and capture by anti-peptide antibodies (SISCAPA)
NL Anderson et al.
JOURNAL OF PROTEOME RESEARCH (2004)
Open mass spectrometry search algorithm
LY Geer et al.
JOURNAL OF PROTEOME RESEARCH (2004)
Hiding behind hydrophobicity -: Transmembrane segments in mass spectrometry
LA Eichacker et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
TANDEM: matching proteins with tandem mass spectra
R Craig et al.
BIOINFORMATICS (2004)
Multiple enzymatic digestion for enhanced sequence coverage of proteins in complex proteomic mixtures using capillary LC with ion trap MS/MS
G Choudhary et al.
JOURNAL OF PROTEOME RESEARCH (2003)
Shotgun identification of protein modifications from protein complexes and lens tissue
MJ MacCoss et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)