4.7 Article

Normalization and Statistical Analysis of Quantitative Proteomics Data Generated by Metabolic Labeling

Related references

Note: Only part of the references are listed.
Editorial Material Biochemical Research Methods

Posterior error probabilities and false discovery rates: Two sides of the same coin

Lukas Kaell et al.

JOURNAL OF PROTEOME RESEARCH (2008)

Editorial Material Biochemical Research Methods

False discovery rates and related statistical concepts in mass spectrometry-based proteomics

Hyungwon Choi et al.

JOURNAL OF PROTEOME RESEARCH (2008)

Article Biochemical Research Methods

Statistical analysis of relative labeled mass spectrometry data from complex samples using ANOVA

Ann L. Oberg et al.

JOURNAL OF PROTEOME RESEARCH (2008)

Article Biochemical Research Methods

Treatment of missing values for multivariate statistical analysis of gel-based proteomics data

Romina Pedreschi et al.

PROTEOMICS (2008)

Article Biochemical Research Methods

Statistics for proteomics: Experimental design and 2-DE differential analysis

Jean-Francois Chich et al.

JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES (2007)

Review Biochemistry & Molecular Biology

Identification of differentially expressed genes and false discovery rate in microarray studies

Arief Gusnanto et al.

CURRENT OPINION IN LIPIDOLOGY (2007)

Article Multidisciplinary Sciences

Quantitative proteomic analysis of distinct mammalian Mediator complexes using normalized spectral abundance factors

Andrew C. Paoletti et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemical Research Methods

Normalization approaches for removing systematic biases associated with mass spectrometry and label-free proteomics

SJ Callister et al.

JOURNAL OF PROTEOME RESEARCH (2006)

Article Biochemical Research Methods

Data analysis methods for detection of differential protein expression in two-dimensional gel electrophoresis

B Meunier et al.

ANALYTICAL BIOCHEMISTRY (2005)

Letter Biochemical Research Methods

Impact of replicate types on proteomic expression analysis

NA Karp et al.

JOURNAL OF PROTEOME RESEARCH (2005)

Article Biochemical Research Methods

Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra

JD Venable et al.

NATURE METHODS (2004)

Article Biotechnology & Applied Microbiology

Bioconductor: open software development for computational biology and bioinformatics

RC Gentleman et al.

GENOME BIOLOGY (2004)

Article Chemistry, Analytical

A correlation algorithm for the automated quantitative analysis of shotgun proteomics data

MJ MacCoss et al.

ANALYTICAL CHEMISTRY (2003)

Article Multidisciplinary Sciences

Statistical significance for genomewide studies

JD Storey et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Article Mathematical & Computational Biology

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

RA Irizarry et al.

BIOSTATISTICS (2003)

Article Multidisciplinary Sciences

Analysis of the Plasmodium falciparum proteome by high-accuracy mass spectrometry

E Lasonder et al.

NATURE (2002)

Article Biochemical Research Methods

DTASelect and contrast: Tools for assembling and comparing protein identifications from shotgun proteomics

DL Tabb et al.

JOURNAL OF PROTEOME RESEARCH (2002)

Article Statistics & Probability

Empirical Bayes analysis of a microarray experiment

B Efron et al.

JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION (2001)