4.7 Article

A multidimensional chromatography technology for in-depth phosphoproteome analysis

Related references

Note: Only part of the references are listed.
Article Biochemical Research Methods

The effects of mass accuracy, data acquisition speed, and search algorithm choice on peptide identification rates in phosphoproteomics

Corey E. Bakalarski et al.

ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2007)

Article Biochemistry & Molecular Biology

PhosphoPep-a phosphoproteome resource for systems biology research in Drosophila Kc167 cells

Bernd Bodenmiller et al.

MOLECULAR SYSTEMS BIOLOGY (2007)

Article Multidisciplinary Sciences

Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases

Marcus B. Smolka et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemical Research Methods

Evaluation and optimization of ZIC-HILIC-RP as an alternative MudPIT strategy

Paul J. Boersema et al.

JOURNAL OF PROTEOME RESEARCH (2007)

Article Biochemical Research Methods

Reproducible isolation of distinct, overlapping segments of the phosphoproteome

Bernd Bodenmiller et al.

NATURE METHODS (2007)

Article Biochemical Research Methods

Large-scale phosphorylation analysis of α-factor-arrested Saccharomyces cerevisiae

Xue Li et al.

JOURNAL OF PROTEOME RESEARCH (2007)

Article Multidisciplinary Sciences

Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry

An Chi et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemistry & Molecular Biology

Mechanism of Dun1 activation by Rad53 phosphorylation in Saccharomyces cerevisiae

Sheng-hong Chen et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2007)

Article Biochemistry & Molecular Biology

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

Jesper V. Olsen et al.

Article Biotechnology & Applied Microbiology

A probability-based approach for high-throughput protein phosphorylation analysis and site localization

Sean A. Beausoleil et al.

NATURE BIOTECHNOLOGY (2006)

Article Chemistry, Analytical

Orthogonality of separation in two-dimensional liquid chromatography

M Gilar et al.

ANALYTICAL CHEMISTRY (2005)

Article Biochemical Research Methods

Dynamic changes in protein-protein interaction and protein phosphorylation probed with amine-reactive isotope tag

MB Smolka et al.

MOLECULAR & CELLULAR PROTEOMICS (2005)

Article Chemistry, Analytical

InsPecT: Identification of posttransiationally modified peptides from tandem mass spectra

S Tanner et al.

ANALYTICAL CHEMISTRY (2005)

Article Biochemical Research Methods

Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns

MR Larsen et al.

MOLECULAR & CELLULAR PROTEOMICS (2005)

Article Biochemical Research Methods

Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway

A Gruhler et al.

MOLECULAR & CELLULAR PROTEOMICS (2005)

Review Biochemical Research Methods

Peptide separation by Hydrophilic-Interaction Chromatography: a review

T Yoshida

JOURNAL OF BIOCHEMICAL AND BIOPHYSICAL METHODS (2004)

Article Multidisciplinary Sciences

Large-scale characterization of HeLa cell nuclear phosphoproteins

SA Beausoleil et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Article Biochemical Research Methods

Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents

PL Ross et al.

MOLECULAR & CELLULAR PROTEOMICS (2004)

Article Multidisciplinary Sciences

Global analysis of protein expression in yeast

S Ghaemmaghami et al.

NATURE (2003)

Article Biotechnology & Applied Microbiology

Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae

SB Ficarro et al.

NATURE BIOTECHNOLOGY (2002)

Article Cell Biology

Mrc1 transduces signals of DNA replication stress to activate Rad53

AA Alcasabas et al.

NATURE CELL BIOLOGY (2001)

Article Biotechnology & Applied Microbiology

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

MP Washburn et al.

NATURE BIOTECHNOLOGY (2001)

Article Multidisciplinary Sciences

A role for Saccharomyces cerevisiae histone H2A in DNA repair

JA Downs et al.

NATURE (2000)