Related references
Note: Only part of the references are listed.Adaptation of Bacillus subtilis carbon core metabolism to simultaneous nutrient limitation and osmotic challenge: a multi-omics perspective
Michael Kohlstedt et al.
ENVIRONMENTAL MICROBIOLOGY (2014)
Overexpression of a non-native deoxyxylulose-dependent vitamin B6 pathway in Bacillus subtilis for the production of pyridoxine
Fabian M. Commichau et al.
METABOLIC ENGINEERING (2014)
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases
Ron Caspi et al.
NUCLEIC ACIDS RESEARCH (2014)
SubtiWiki-a database for the model organism Bacillus subtilis that links pathway, interaction and expression information
Raphael H. Michna et al.
NUCLEIC ACIDS RESEARCH (2014)
Total Synthesis of a Functional Designer Eukaryotic Chromosome
Narayana Annaluru et al.
SCIENCE (2014)
Rapid and Reliable DNA Assembly via Ligase Cycling Reaction
Stefan de Kok et al.
ACS SYNTHETIC BIOLOGY (2014)
Synthetic biology: Tools to design microbes for the production of chemicals and fuels
Sang Woo Seo et al.
BIOTECHNOLOGY ADVANCES (2013)
Metabolic engineering of Escherichia coli: A sustainable industrial platform for bio-based chemical production
Xianzhong Chen et al.
BIOTECHNOLOGY ADVANCES (2013)
Meeting report: The Cambridge BioDesign TechEvent - Synthetic Biology, a new Age of Wonder?
Mario Juhas et al.
BIOTECHNOLOGY JOURNAL (2013)
Bacillus subtilis Mutants with Knockouts of the Genes Encoding Ribonucleases RNase Y and RNase J1 Are Viable, with Major Defects in Cell Morphology, Sporulation, and Competence
Sabine Figaro et al.
JOURNAL OF BACTERIOLOGY (2013)
Cyclic Di-AMP Homeostasis in Bacillus subtilis BOTH LACK AND HIGH LEVEL ACCUMULATION OF THE NUCLEOTIDE ARE DETRIMENTAL FOR CELL GROWTH
Felix M. P. Mehne et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
Genetic manipulations restored the growth fitness of reduced-genome Escherichia coli
Yasutaka Hirokawa et al.
JOURNAL OF BIOSCIENCE AND BIOENGINEERING (2013)
In silico metabolic engineering of Bacillus subtilis for improved production of riboflavin, Egl-237, (R,R)-2,3-butanediol and isobutanol
Tong Hao et al.
MOLECULAR BIOSYSTEMS (2013)
Essential genes in Bacillus subtilis: a re-evaluation after ten years
Fabian M. Commichau et al.
MOLECULAR BIOSYSTEMS (2013)
Cyclic di-AMP: another second messenger enters the fray
Rebecca M. Corrigan et al.
NATURE REVIEWS MICROBIOLOGY (2013)
Improved production of secreted heterologous enzyme in Bacillus subtilis strain MGB874 via modification of glutamate metabolism and growth conditions
Kenji Manabe et al.
MICROBIAL CELL FACTORIES (2013)
Multiple rRNA operons are essential for efficient cell growth and sporulation as well as outgrowth in Bacillus subtilis
Koichi Yano et al.
MICROBIOLOGY-SGM (2013)
Building the repertoire of dispensable chromosome regions in Bacillus subtilis entails major refinement of cognate large-scale metabolic model
Kosei Tanaka et al.
NUCLEIC ACIDS RESEARCH (2013)
EcoCyc: fusing model organism databases with systems biology
Ingrid M. Keseler et al.
NUCLEIC ACIDS RESEARCH (2013)
Selection-Driven Accumulation of Suppressor Mutants in Bacillus subtilis: The Apparent High Mutation Frequency of the Cryptic gudB Gene and the Rapid Clonal Expansion of gudB+ Suppressors Are Due to Growth under Selection
Katrin Gunka et al.
PLOS ONE (2013)
Biosynthesis of polyhydroxyalkanoates containing 2-hydroxybutyrate from unrelated carbon source by metabolically engineered Escherichia coli
Si Jae Park et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2012)
Moonlighting is mainstream: Paradigm adjustment required
Shelley D. Copley
BIOESSAYS (2012)
Improvement of d-lactate productivity in recombinant Escherichia coli by coupling production with growth
Li Zhou et al.
BIOTECHNOLOGY LETTERS (2012)
Programmable bacterial catalysis - designing cells for biosynthesis of value-added compounds
Carolyn M. C. Lam et al.
FEBS LETTERS (2012)
Inactivation of Ribosomal Protein Genes in Bacillus subtilis Reveals Importance of Each Ribosomal Protein for Cell Proliferation and Cell Differentiation
Genki Akanuma et al.
JOURNAL OF BACTERIOLOGY (2012)
In the fast lane: Large-scale bacterial genome engineering
Tamas Feher et al.
JOURNAL OF BIOTECHNOLOGY (2012)
Genetically switched D-lactate production in Escherichia coli
Li Zhou et al.
METABOLIC ENGINEERING (2012)
EcoliWiki: a wiki-based community resource for Escherichia coli
Brenley K. McIntosh et al.
NUCLEIC ACIDS RESEARCH (2012)
SLiCE: a novel bacterial cell extract-based DNA cloning method
Yongwei Zhang et al.
NUCLEIC ACIDS RESEARCH (2012)
High Confidence Prediction of Essential Genes in Burkholderia Cenocepacia
Mario Juhas et al.
PLOS ONE (2012)
Inhibitory cross-talk upon introduction of a new metabolic pathway into an existing metabolic network
Juhan Kim et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Global Network Reorganization During Dynamic Adaptations of Bacillus subtilis Metabolism
Joerg Martin Buescher et al.
SCIENCE (2012)
Condition-Dependent Transcriptome Reveals High-Level Regulatory Architecture in Bacillus subtilis
Pierre Nicolas et al.
SCIENCE (2012)
Essential genes as antimicrobial targets and cornerstones of synthetic biology
Mario Juhas et al.
TRENDS IN BIOTECHNOLOGY (2012)
Patterns of Evolutionary Conservation of Essential Genes Correlate with Their Compensability
Tobias Bergmiller et al.
PLOS GENETICS (2012)
The Essential Function of B-subtilis RNase III Is to Silence Foreign Toxin Genes
Sylvain Durand et al.
PLOS GENETICS (2012)
Infection strategies of enteric pathogenic Escherichia coli
Abigail Clements et al.
GUT MICROBES (2012)
Combined Effect of Improved Cell Yield and Increased Specific Productivity Enhances Recombinant Enzyme Production in Genome-Reduced Bacillus subtilis Strain MGB874
Kenji Manabe et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Metabolic Engineering of Escherichia coli for the Production of 1,2-Propanediol From Glycerol
James M. Clomburg et al.
BIOTECHNOLOGY AND BIOENGINEERING (2011)
Inactivation of the RluD Pseudouridine Synthase Has Minimal Effects on Growth and Ribosome Function in Wild-Type Escherichia coli and Salmonella enterica
Michael O'Connor et al.
JOURNAL OF BACTERIOLOGY (2011)
Characterisation of the Escherichia coli strain associated with an outbreak of haemolytic uraemic syndrome in Germany, 2011: a microbiological study
Martina Bielaszewska et al.
LANCET INFECTIOUS DISEASES (2011)
Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol
Harry Yim et al.
NATURE CHEMICAL BIOLOGY (2011)
Circular polymerase extension cloning for high-throughput cloning of complex and combinatorial DNA libraries
Jiayuan Quan et al.
NATURE PROTOCOLS (2011)
Origins of the E. coli Strain Causing an Outbreak of Hemolytic-Uremic Syndrome in Germany
David A. Rasko et al.
NEW ENGLAND JOURNAL OF MEDICINE (2011)
Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology
Alexander Mellmann et al.
PLOS ONE (2011)
Synthetic Biology: Integrated Gene Circuits
Nagarajan Nandagopal et al.
SCIENCE (2011)
Essence of life: essential genes of minimal genomes
Mario Juhas et al.
TRENDS IN CELL BIOLOGY (2011)
Biofuel production in Escherichia coli: the role of metabolic engineering and synthetic biology
James M. Clomburg et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2010)
Update on designing and building minimal cells
Michael C. Jewett et al.
CURRENT OPINION IN BIOTECHNOLOGY (2010)
Functional Convergence in Reduced Genomes of Bacterial Symbionts Spanning 200 My of Evolution
John P. McCutcheon et al.
GENOME BIOLOGY AND EVOLUTION (2010)
Small RNAs and Small Proteins Involved in Resistance to Cell Envelope Stress and Acid Shock in Escherichia coli: Analysis of a Bar-Coded Mutant Collection
Errett C. Hobbs et al.
JOURNAL OF BACTERIOLOGY (2010)
Small Stress Response Proteins in Escherichia coli: Proteins Missed by Classical Proteomic Studies
Matthew R. Hemm et al.
JOURNAL OF BACTERIOLOGY (2010)
High-fidelity gene synthesis by retrieval of sequence-verified DNA identified using high-throughput pyrosequencing
Mark Matzas et al.
NATURE BIOTECHNOLOGY (2010)
A synthetic DNA transplant
Mitsuhiro Itaya
NATURE BIOTECHNOLOGY (2010)
Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips
Sriram Kosuri et al.
NATURE BIOTECHNOLOGY (2010)
RNA polymerase mutants found through adaptive evolution reprogram Escherichia coli for optimal growth in minimal media
Tom M. Conrad et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Creation of a Bacterial Cell Controlled by a Chemically Synthesized Genome
Daniel G. Gibson et al.
SCIENCE (2010)
Acetylation of Metabolic Enzymes Coordinates Carbon Source Utilization and Metabolic Flux
Qijun Wang et al.
SCIENCE (2010)
Isoprenoid Pathway Optimization for Taxol Precursor Overproduction in Escherichia coli
Parayil Kumaran Ajikumar et al.
SCIENCE (2010)
Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants
Gemma C. Langridge et al.
GENOME RESEARCH (2009)
Enzymatic assembly of DNA molecules up to several hundred kilobases
Daniel G. Gibson et al.
NATURE METHODS (2009)
Transcriptome analysis guided metabolic engineering of Bacillus subtilis for riboflavin production
Shuobo Shi et al.
METABOLIC ENGINEERING (2009)
Metabolic engineering of a reduced-genome strain of Escherichia coli for L-threonine production
Jun Hyoung Lee et al.
MICROBIAL CELL FACTORIES (2009)
Circular Polymerase Extension Cloning of Complex Gene Libraries and Pathways
Jiayuan Quan et al.
PLOS ONE (2009)
Creating Bacterial Strains from Genomes That Have Been Cloned and Engineered in Yeast
Carole Lartigue et al.
SCIENCE (2009)
Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths
Marie Touchon et al.
PLOS GENETICS (2009)
Toward minimal bacterial cells: evolution vs. design
Andres Moya et al.
FEMS MICROBIOLOGY REVIEWS (2009)
Minimal Escherichia coli cell for the most efficient production of ethanol from hexoses and pentoses
Cong T. Trinh et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Has nature already identified all useful antibacterial targets?
Dirk Bumann
CURRENT OPINION IN MICROBIOLOGY (2008)
Enhanced recombinant protein productivity by genome reduction in Bacillus subtilis
Takuya Morimoto et al.
DNA RESEARCH (2008)
Superpositioning of Deletions Promotes Growth of Escherichia coli with a Reduced Genome
Hiroshi Mizoguchi et al.
DNA RESEARCH (2008)
The pangenome structure of Escherichia coli:: Comparative genomic analysis of E-coli commensal and pathogenic isolates
David A. Rasko et al.
JOURNAL OF BACTERIOLOGY (2008)
Small membrane proteins found by comparative genomics and ribosome binding site models
Matthew R. Hemm et al.
MOLECULAR MICROBIOLOGY (2008)
Large-scale transposon mutagenesis of Mycoplasma pulmonis
Christopher T. French et al.
MOLECULAR MICROBIOLOGY (2008)
The art and design of genetic screens: RNA interference
Michael Boutros et al.
NATURE REVIEWS GENETICS (2008)
Towards the development of Bacillus subtilis as a cell factory for membrane proteins and protein complexes
Jessica C. Zweers et al.
MICROBIAL CELL FACTORIES (2008)
Rapid and efficient construction of markerless deletions in the Escherichia coli genome
Byung Jo Yu et al.
NUCLEIC ACIDS RESEARCH (2008)
Genome transplantation in bacteria: Changing one species to another
Carole Lartigue et al.
SCIENCE (2007)
Systematic genome reductions:: Theoretical and experimental approaches
Tamas Feher et al.
CHEMICAL REVIEWS (2007)
A regulatory protein-protein interaction governs glutamate biosynthesis in Bacillus subtilis:: the glutamate dehydrogenase RocG moonlights in controlling the transcription factor GltC
Fabian M. Commichau et al.
MOLECULAR MICROBIOLOGY (2007)
Balancing a heterologous mevalonate pathway for improved isoprenoid production in Escherichia coli
Douglas J. Pitera et al.
METABOLIC ENGINEERING (2007)
Harnessing homologous recombination in vitro to generate recombinant DNA via SLIC
Mamie Z. Li et al.
NATURE METHODS (2007)
Bacillus minimum genome factory: effective utilization of microbial genome information
Katsutoshi Ara et al.
BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY (2007)
Functional analysis of 11 putative essential genes in Bacillus subtilis
Alison Hunt et al.
MICROBIOLOGY-SGM (2006)
Emergent properties of reduced-genome Escherichia coli
G Pósfai et al.
SCIENCE (2006)
Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome
M Hashimoto et al.
MOLECULAR MICROBIOLOGY (2005)
Developments in the use of Bacillus species for industrial production
M Schallmey et al.
CANADIAN JOURNAL OF MICROBIOLOGY (2004)
Experimental determination and system level analysis of essential genes in Escherichia coli MG1655
SY Gerdes et al.
JOURNAL OF BACTERIOLOGY (2003)
Essential Bacillus subtilis genes
K Kobayashi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Genome engineering reveals large dispensable regions in Bacillus subtilis
H Westers et al.
MOLECULAR BIOLOGY AND EVOLUTION (2003)
Minimization of the Escherichia coli genome using a Tn5-targeted Cre/loxP excision system
BJ Yu et al.
NATURE BIOTECHNOLOGY (2002)
Thiol-disulfide oxidoreductases are essential for the production of the lantibiotic sublancin 168
R Dorenbos et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Engineering a reduced Escherichia coli genome
V Kolisnychenko et al.
GENOME RESEARCH (2002)
Share Paper
