4.2 Article

Identification of non-coding RNAs in environmental vibrios

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Translational Regulation of Gene Expression by an Anaerobically Induced Small Non-coding RNA in Escherichia coli

Anders Boysen et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2010)

Article Biochemical Research Methods

Infernal 1.0: inference of RNA alignments

Eric P. Nawrocki et al.

BIOINFORMATICS (2009)

Article Evolutionary Biology

Genomic taxonomy of vibrios

Cristiane C. Thompson et al.

BMC EVOLUTIONARY BIOLOGY (2009)

Article Biotechnology & Applied Microbiology

Small noncoding RNA GcvB is a novel regulator of acid resistance in Escherichia coli

Ye Jin et al.

BMC GENOMICS (2009)

Review Biochemistry & Molecular Biology

Regulatory RNAs in Bacteria

Lauren S. Waters et al.

Article Biochemistry & Molecular Biology

Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing

Jane M. Liu et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Biochemistry & Molecular Biology

A new Vibrio cholerae sRNA modulates colonization and affects release of outer membrane vesicles

Tianyan Song et al.

MOLECULAR MICROBIOLOGY (2008)

Article Immunology

RyhB, an iron-responsive small RNA molecule, regulates Shigella dysenteriae virulence

Erin R. Murphy et al.

INFECTION AND IMMUNITY (2007)

Review Microbiology

Identification of bacterial small non-coding RNAs: experimental approaches

Shoshy Altuvia

CURRENT OPINION IN MICROBIOLOGY (2007)

Review Microbiology

The role of RNAs in the regulation of virulence-gene expression

P Romby et al.

CURRENT OPINION IN MICROBIOLOGY (2006)

Article Biochemistry & Molecular Biology

Prediction of CsrA-regulating small RNAs in bacteria and their experimental verification in Vibrio fischeri

Prajna R. Kulkarni et al.

NUCLEIC ACIDS RESEARCH (2006)

Review Biochemistry & Molecular Biology

Experimental approaches to identify non-coding RNAs

A Huttenhofer et al.

NUCLEIC ACIDS RESEARCH (2006)

Review Biochemistry & Molecular Biology

How to find small non-coding RNAs in bacteria

J Vogel et al.

BIOLOGICAL CHEMISTRY (2005)

Review Biochemistry & Molecular Biology

Post-transcriptional control of gene expression: a genome-wide perspective

J Mata et al.

TRENDS IN BIOCHEMICAL SCIENCES (2005)

Article Biochemistry & Molecular Biology

sRNAPredict: an integrative computational approach to identify sRNAs in bacterial genomes

J Livny et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemistry & Molecular Biology

Rfam: annotating non-coding RNAs in complete genomes

S Griffiths-Jones et al.

NUCLEIC ACIDS RESEARCH (2005)

Review Biochemistry & Molecular Biology

MicroRNAs: Genomics, biogenesis, mechanism, and function

DP Bartel

Article Biochemical Research Methods

A System for Automated Bacterial (genome) Integrated Annotation - SABIA

LGP Almeida et al.

BIOINFORMATICS (2004)

Article Biochemistry & Molecular Biology

Metabolite-binding RNA domains are present in the genes of eukaryotes

N Sudarsan et al.

Article Biochemistry & Molecular Biology

Rfam: an RNA family database

S Griffiths-Jones et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Cell Biology

Spot 42 RNA mediates discoordinate expression of the E-coli galactose operon

T Moller et al.

GENES & DEVELOPMENT (2002)

Review Genetics & Heredity

Non-coding RNA genes and the modern RNA world

SR Eddy

NATURE REVIEWS GENETICS (2001)

Article Biochemistry & Molecular Biology

fhlA repression by OxyS RNA:: Kissing complex formation at two sites results in a stable antisense-target RNA complex

L Argaman et al.

JOURNAL OF MOLECULAR BIOLOGY (2000)

Article Biochemistry & Molecular Biology

6S RNA regulates E-coli RNA polymerase activity

KM Wassarman et al.