4.8 Article

Oxidative cyclizations in orthosomycin biosynthesis expand the known chemistry of an oxygenase superfamily

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Characterization of the Calicheamicin Orsellinate C2-O-Methyltransferase CalO6

Shanteri Singh et al.

CHEMBIOCHEM (2014)

Article Biochemistry & Molecular Biology

Direct nitration and azidation of aliphatic carbons by an iron-dependent halogenase

Megan L. Matthews et al.

NATURE CHEMICAL BIOLOGY (2014)

Article Biochemistry & Molecular Biology

Plasticity of the Quinone-binding Site of the Complex II Homolog Quinol:Fumarate Reductase

Prashant K. Singh et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2013)

Article Biochemical Research Methods

Towards automated crystallographic structure refinement with phenix.refine

Pavel V. Afonine et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2012)

Article Biochemistry & Molecular Biology

Role of the jelly-roll fold in substrate binding by 2-oxoglutarate oxygenases

WeiShen Aik et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2012)

Article Biochemistry & Molecular Biology

Characterization of two methylenedioxy bridge-forming cytochrome P450-dependent enzymes of alkaloid formation in the Mexican prickly poppy Argemone mexicana

Maria Luisa Diaz Chavez et al.

ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2011)

Article Biochemistry & Molecular Biology

Crystal structure of PHYHD1A, a 2OG oxygenase related to phytanoyl-CoA hydroxylase

Zhihong Zhang et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2011)

Article Biochemistry & Molecular Biology

The Moderately Efficient Enzyme: Evolutionary and Physicochemical Trends Shaping Enzyme Parameters

Arren Bar-Even et al.

BIOCHEMISTRY (2011)

Article Biochemistry & Molecular Biology

Structural Basis for Human PHF2 Jumonji Domain Interaction with Metal Ions

John R. Horton et al.

JOURNAL OF MOLECULAR BIOLOGY (2011)

Article Biochemical Research Methods

Experimental phasing with SHELXC/D/E: combining chain tracing with density modification

George M. Sheldrick

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)

Article Biochemical Research Methods

Features and development of Coot

P. Emsley et al.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)

Article Biochemical Research Methods

PHENIX: a comprehensive Python-based system for macromolecular structure solution

Paul D. Adams et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2010)

Article Multidisciplinary Sciences

Conformational switch triggered by α-ketoglutarate in a halogenase of curacin A biosynthesis

Dheeraj Khare et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Biochemical Research Methods

Decision-making in structure solution using Bayesian estimates of map quality: the PHENIX AutoSol wizard

Thomas C. Terwilliger et al.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2009)

Article Chemistry, Multidisciplinary

Structural Analysis of an Open Active Site Conformation of Nonheme Iron Halogenase CytC3

Cintyu Wong et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)

Article Multidisciplinary Sciences

Substrate positioning controls the partition between halogenation and hydroxylation in the aliphatic halogenase, SyrB2

Megan L. Matthews et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Biochemistry & Molecular Biology

Structural characterization of CalO2: A putative orsellinic acid P450 oxidase in the calicheamicin biosynthetic pathway

Jason G. Mccoy et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2009)

Review Multidisciplinary Sciences

Antibiotics for Emerging Pathogens

Michael A. Fischbach et al.

SCIENCE (2009)

Article Biochemical Research Methods

Iterative model building, structure refinement and density modification with the PHENIX AutoBuild wizard

Thomas C. Terwilliger et al.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2008)

Article Biochemistry & Molecular Biology

Crystal structure of the non-heme iron dioxygenase PtIH in pentalenolactone biosynthesis

Zheng You et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2007)

Article Chemistry, Multidisciplinary

Phaser crystallographic software

Airlie J. McCoy et al.

JOURNAL OF APPLIED CRYSTALLOGRAPHY (2007)

Article Biochemistry & Molecular Biology

Specificity and mechanism of JMJD2A, a trimethyllysine-specific histone demethylase

Jean-Francois Couture et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Surflex-Dock 2.1: Robust performance from ligand energetic modeling, ring flexibility, and knowledge-based search

Ajay N. Jain

JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN (2007)

Article Biochemistry & Molecular Biology

Mechanism for cyclization reaction by clavaminic acid synthase. Insights from modeling studies

Tomasz Borowski et al.

BIOCHEMISTRY (2007)

Article Biochemical Research Methods

Version 1.2 of the Crystallography and NMR system

Axel T. Brunger

NATURE PROTOCOLS (2007)

Article Chemistry, Medicinal

Extra precision glide: Docking and scoring incorporating a model of hydrophobic enclosure for protein-ligand complexes

Richard A. Friesner et al.

JOURNAL OF MEDICINAL CHEMISTRY (2006)

Article Biochemistry & Molecular Biology

Structure of human phytanoyl-CoA 2-hydroxylase identifies molecular mechanisms of Refsum disease

MA McDonough et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2005)

Article Biotechnology & Applied Microbiology

Genes involved in formation and attachment of a two-carbon chain as a component of eurekanate, a branched-chain sugar moiety of avilamycin A

I Treede et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)

Article Chemistry, Multidisciplinary

Direct detection of oxygen intermediates in the non-heme Fe enzyme taurine/α-ketoglutarate dioxygenase

DA Proshlyakov et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2004)

Article Chemistry, Multidisciplinary

EXAFS spectroscopic evidence for an Fe=O unit in the Fe(IV) intermediate observed during oxygen activation by taurine:α-ketoglutarate dioxygenase

PJ Riggs-Gelasco et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2004)

Software Review Chemistry, Multidisciplinary

HKL2MAP:: a graphical user interface for macromolecular phasing with SHELX programs

T Pape et al.

JOURNAL OF APPLIED CRYSTALLOGRAPHY (2004)

Article Biochemistry & Molecular Biology

How well is enzyme function conserved as a function of pairwise sequence identity?

WD Tian et al.

JOURNAL OF MOLECULAR BIOLOGY (2003)

Article Multidisciplinary Sciences

PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin

B Gust et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Article Plant Sciences

Isolation and characterization of novel oligosaccharides related to Ziracin

M Chu et al.

JOURNAL OF NATURAL PRODUCTS (2002)

Article Biotechnology & Applied Microbiology

Characterization of the biosynthetic gene cluster for the oligosaccharide antibiotic, Evernimicin, in Micromonospora carbonacea var. africana ATCC39149

TJ Hosted et al.

JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY (2001)

Article Multidisciplinary Sciences

A novel site of antibiotic action in the ribosome: Interaction of evernimicin with the large ribosomal subunit

L Belova et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)

Article Microbiology

Evernimicin (SCH27899) inhibits a novel ribosome target site: Analysis of 23S ribosomal DNA mutants

PV Adrian et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2000)