Related references
Note: Only part of the references are listed.Insights on the Emergence of Mycobacterium tuberculosis from the Analysis of Mycobacterium kansasii
Joyce Wang et al.
GENOME BIOLOGY AND EVOLUTION (2015)
Reemergence and Amplification of Tuberculosis in the Canadian Arctic
Robyn S. Lee et al.
JOURNAL OF INFECTIOUS DISEASES (2015)
The genetic prehistory of the New World Arctic
Maanasa Raghavan et al.
SCIENCE (2014)
A robust SNP barcode for typing Mycobacterium tuberculosis complex strains
Francesc Coll et al.
NATURE COMMUNICATIONS (2014)
BEAST 2: A Software Platform for Bayesian Evolutionary Analysis
Remco Bouckaert et al.
PLOS COMPUTATIONAL BIOLOGY (2014)
Pulmonary Infection with Hypervirulent Mycobacteria Reveals a Crucial Role for the P2X7 Receptor in Aggressive Forms of Tuberculosis
Eduardo P. Amaral et al.
PLOS PATHOGENS (2014)
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
Helga Thorvaldsdottir et al.
BRIEFINGS IN BIOINFORMATICS (2013)
Evidence for Diversifying Selection in a Set of Mycobacterium tuberculosis Genes in Response to Antibiotic- and Nonantibiotic-Related Pressure
Nuno S. Osorio et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study
Timothy M. Walker et al.
LANCET INFECTIOUS DISEASES (2013)
Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans
Inaki Comas et al.
NATURE GENETICS (2013)
Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis
Philip Supply et al.
NATURE GENETICS (2013)
Whole Genome Sequencing versus Traditional Genotyping for Investigation of a Mycobacterium tuberculosis Outbreak: A Longitudinal Molecular Epidemiological Study
Andreas Roetzer et al.
PLOS MEDICINE (2013)
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3
Pablo Cingolani et al.
FLY (2012)
Improving the Accuracy of Demographic and Molecular Clock Model Comparison While Accommodating Phylogenetic Uncertainty
Guy Baele et al.
MOLECULAR BIOLOGY AND EVOLUTION (2012)
Bayesian Phylogenetics with BEAUti and the BEAST 1.7
Alexei J. Drummond et al.
MOLECULAR BIOLOGY AND EVOLUTION (2012)
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
Koichiro Tamura et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
Deciphering the role of IS6110 in a highly transmissible Mycobacterium tuberculosis Beijing strain, GC1237
Henar Alonso et al.
TUBERCULOSIS (2011)
Possible underlying mechanisms for successful emergence of the Mycobacterium tuberculosis Beijing genotype strains
Ida Parwati et al.
LANCET INFECTIOUS DISEASES (2010)
Human T cell epitopes of Mycobacterium tuberculosis are evolutionarily hyperconserved
Inaki Comas et al.
NATURE GENETICS (2010)
The consequences of genetic drift for bacterial genome complexity
Chih-Horng Kuo et al.
GENOME RESEARCH (2009)
Trends in Prokaryotic Evolution Revealed by Comparison of Closely Related Bacterial and Archaeal Genomes
Pavel S. Novichkov et al.
JOURNAL OF BACTERIOLOGY (2009)
Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis
Timothy P. Stinear et al.
GENOME RESEARCH (2008)
Comparing Patterns of Natural Selection across Species Using Selective Signatures
B. Jesse Shapiro et al.
PLoS Genetics (2008)
High Functional Diversity in Mycobacterium tuberculosis Driven by Genetic Drift and Human Demography
Ruth Hershberg et al.
PLOS BIOLOGY (2008)
Origin, spread and demography of the Mycobacterium tuberculosis complex
Thierry Wirth et al.
PLOS PATHOGENS (2008)
The hypervirulent Mycobacterium tuberculosis strain HN878 induces a potent TH1 response followed by rapid down-regulation
Diane Ordway et al.
JOURNAL OF IMMUNOLOGY (2007)
Global phylogeography of Mycobacterium tuberculosis and implications for tuberculosis product development
Sebastien Gagneux et al.
LANCET INFECTIOUS DISEASES (2007)
Relaxed phylogenetics and dating with confidence
Alexei J. Drummond et al.
PLOS BIOLOGY (2006)
Comparisons of dN/dS are time dependent for closely related bacterial genomes
EPC Rocha et al.
JOURNAL OF THEORETICAL BIOLOGY (2006)
Variable host-pathogen compatibility in Mycobacterium tuberculosis
S Gagneux et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Genome-wide requirements for Mycobacterium tuberculosis adaptation and survival in macrophages
J Rengarajan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Functional and evolutionary genomics of Mycobacterium tuberculosis:: Insights from genomic deletions in 100 strains
AG Tsolaki et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Macro-array and bioinformatic analyses reveal mycobacterial 'core' genes, variation in the ESAT-6 gene family and new phylogenetic markers for the Mycobacterium tuberculosis complex
M Marmiesse et al.
MICROBIOLOGY-SGM (2004)
A glycolipid of hypervirulent tuberculosis strains that inhibits the innate immune response
MB Reed et al.
NATURE (2004)
Genetic requirements for mycobacterial survival during infection
CM Sassetti et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Genes required for mycobacterial growth defined by high density mutagenesis
CM Sassetti et al.
MOLECULAR MICROBIOLOGY (2003)
Tuberculosis in the Inuit community of Quebec, Canada
D Nguyen et al.
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE (2003)
Caloramator viterbensis sp nov., a novel thermophilic, glycerol-fermenting bacterium isolated from a hot spring in Italy
M Seyfried et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2002)
Artemis: sequence visualization and annotation
K Rutherford et al.
BIOINFORMATICS (2000)
Share Paper
