4.4 Article

High-throughput production of human proteins for crystallization: The SGC experience

Journal

JOURNAL OF STRUCTURAL BIOLOGY
Volume 172, Issue 1, Pages 3-13

Publisher

ACADEMIC PRESS INC ELSEVIER SCIENCE
DOI: 10.1016/j.jsb.2010.06.008

Keywords

Ligation-independent cloning; Structural genomics; Protein expression; Protein purification; Structure prediction; Open source

Funding

  1. Canadian Institutes for Health Research [1097737]
  2. Canadian Foundation for Innovation
  3. Genome Canada through the Ontario Genomics Institute
  4. GlaxoSmithKline
  5. Karolinska Institutet
  6. Knut and Alice Wallenberg Foundation
  7. Ontario Innovation Trust
  8. Ontario Ministry for Research and Innovation
  9. Merck and Co., Inc.
  10. Novartis Research Foundation
  11. Swedish Agency for Innovation Systems
  12. Swedish Foundation for Strategic Research
  13. Wellcome Trust

Ask authors/readers for more resources

Producing purified human proteins with high yield and purity remains a considerable challenge. We describe the methods utilized in the Structural Genomics Consortium (SGC) in Oxford, resulting in successful purification of 48% of human proteins attempted; of those, the structures of similar to 40% were solved by X-ray crystallography. The main driver has been the parallel processing of multiple (typically 9-20) truncated constructs of each target; modest diversity in vectors and host systems; and standardized purification procedures. We provide method details as well as data on the properties of the constructs leading to crystallized proteins and the impact of methodological variants. These can be used to formulate guidelines for initial approaches to expression of new eukaryotic proteins. (C) 2010 Elsevier Inc. All rights reserved.

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