Journal
JOURNAL OF PROTEOME RESEARCH
Volume 8, Issue 4, Pages 2114-2121Publisher
AMER CHEMICAL SOC
DOI: 10.1021/pr801045q
Keywords
Global metabolite profiling; metabonomics; metabolomics; plasma; UPLC-MS
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Funding
- EU committee Transfer of Knowledge Industry-Academia [TOK-IAP 29640]
- Aristotle University Thessaloniki, Greece
- AstraZeneca, U.K
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A study of the factors involved in obtaining valid global metabolite profiles from the LC-MS of human plasma for the purposes of metabonomic analysis has been undertaken. Plasma proteins were either precipitated with 3 vol of organic solvent (methanol or acetonitrile) or subjected to solid phase extraction (SPE) on a C18-bonded phase. For chromatography, a reversed-phase gradient system, based on acidified water/methanol, was used. Ultra performance liquid chromatography (UPLC) was performed on a C18-bonded stationary phase using sub 2 mu m particles packed into a 2.1 x 100 mm column. The eluent from the column was subjected to analysis by positive electrospray ionization using a time-of-flight mass spectrometer. To obtain reproducible results for solvent-precipitated plasma, the conditioning of the system with injections of matrix prior to the main analytical run was essential. The repeatability of the methodology was improved significantly when the sample preparation was performed using solid phase extraction.
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