4.6 Article

UV Absorption Spectrum of Alternating DNA Duplexes. Analysis of Excitonic and Charge Transfer Interactions

Journal

JOURNAL OF PHYSICAL CHEMISTRY A
Volume 116, Issue 46, Pages 11151-11160

Publisher

AMER CHEMICAL SOC
DOI: 10.1021/jp304725r

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Funding

  1. Austrian Science Fund
  2. F41 Vienna Computational Materials Laboratory (ViCoM)
  3. National Science Foundation Partnership in International Research and Education (PIRE) [OISE-0730114]
  4. Robert A. Welch Foundation [D-0005]
  5. Vienna Scientific Cluster [70019, 70151]
  6. Austrian Academy of Sciences

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A detailed investigation Of the excited, States: accessed by UV absorption in alternating DNA duplexes was performed by means of an extensive sampling of intra: and intermolecular degrees of freedom. The excited states were computed using the algebraic diagrammatic construction method to second order (ADC(2)). A realistic DNA environment was included through an electrostatic embedding QM/MM coupling scheme: The results indicate that (i) most excited states are delocalized over at most two bases, (ii) charge transfer states are located at higher energies than the bright states in the Franck-Condon region, but (iii) coupling :between locally excited and charge transfers states may provide a route to dynamical charge separation, and (iv) spectral broadening is mainly caused by intramolecular vibrations.

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