4.2 Article

Genetic variants in SLC22A17 and SLC22A7 are associated with anthracycline-induced cardiotoxicity in children

Journal

PHARMACOGENOMICS
Volume 16, Issue 10, Pages 1065-1076

Publisher

FUTURE MEDICINE LTD
DOI: 10.2217/PGS.15.61

Keywords

anthracyclines; association study; cardiotoxicity; childhood cancer; pharmacogenomics

Funding

  1. Canadian Institutes of Health Research
  2. Canada Foundation for Innovation
  3. Genome Canada
  4. Genome British Columbia
  5. Genome Quebec
  6. Child & Family Research Institute (Vancouver, BC, Canada)
  7. Faculty of Pharmaceutical Sciences, University of British Columbia
  8. Faculty of Medicine, University of British Columbia
  9. University of Western Ontario
  10. Canada Gene Cure Foundation
  11. Canadian Society of Clinical Pharmacology
  12. C17 Research Network
  13. Canadian Paediatric Society
  14. Merck Frosst
  15. Janssen-Ortho
  16. Illumina
  17. Eli Lilly
  18. Pfizer
  19. Genome Canada Applied Health Research Program
  20. Canada Foundation for Innovation/Canadian Institutes of Health Research Regional/National Clinical Research Initiatives
  21. Genome British Columbia Translational Program for Applied Health
  22. Michael Smith Foundation for Health Research
  23. Child & Family Research Institute
  24. Stichting Kindergeneeskundig Kankeronderzoek (Foundation for Pediatric Cancer Research)
  25. Childhood Cancer Foundation-Candlelighters Canada

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To identify novel variants associated with anthracycline-induced cardiotoxicity and to assess these in a genotype-guided risk prediction model. Patients & methods: Two cohorts treated for childhood cancer (n = 344 and 218, respectively) were genotyped for 4578 SNPs in drug ADME and toxicity genes. Results: Significant associations were identified in SLC22A17 (rs4982753; p = 0.0078) and SLC22A7 (rs4149178; p = 0.0034), with replication in the second cohort (p = 0.0071 and 0.047, respectively). Additional evidence was found for SULT2B1 and several genes related to oxidative stress. Adding the SLC22 variants to the prediction model improved its discriminative ability (AUC 0.78 vs 0.75 [p = 0.029]). Conclusion: Two novel variants in SLC22A17 and SLC22A7 were significantly associated with anthracycline-induced cardiotoxicity and improved a genotype-guided risk prediction model, which could improve patient risk stratification.

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