4.7 Article

Structural and Molecular Genetic Insight into a Widespread Sulfur Oxidation Pathway

Journal

JOURNAL OF MOLECULAR BIOLOGY
Volume 384, Issue 5, Pages 1287-1300

Publisher

ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD
DOI: 10.1016/j.jmb.2008.10.016

Keywords

DsrEFH; dissimilatory sulfur oxidation; crystal structure; anoxygenic phototrophic sulfur bacteria YchN fold; dissimilatory sulfite reductase

Funding

  1. Deutsche Forschungsgemeinschaft [Da 351/3-3, 3-4, 3-5]
  2. Korea Research Foundation Grant funded by the Korean Government (Ministry of Education and Human Resource Development, Basic Research Promotion Fund [KRF-2007-313-C00618]
  3. Ministry of Science and Technology and Korea Science and Engineering Foundation through the Center for Cell Signaling and Drug Discovery Research at Ewha Womans University [R15-2006-020]
  4. National Institutes of Health [GM 62412]
  5. National Research Foundation of Korea [R15-2006-020-02002-0] Funding Source: Korea Institute of Science & Technology Information (KISTI), National Science & Technology Information Service (NTIS)

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Many environmentally important photo- and chemolithoautotrophic bacteria accumulate globules of polymeric, water-insoluble sulfur as a transient product during oxidation of reduced sulfur compounds. Oxidation of this sulfur requires the concerted action of Dsr proteins. However, individual functions and interplay of these proteins are largely unclear. We proved with a Delta dsrE mutant experiment that the cytoplasmic alpha(2)beta(2)gamma(2)-structured protein DsrEFH. is absolutely essential for the oxidation of sulfur stored in the intracellular sulfur globules of the purple sulfur bacterial model organism Allochromatium vinosum. The ability to degrade stored sulfur was fully regained upon complementation with dsrEFH in trans. The crystal structure of DsrEFH was determined at 2.5 angstrom resolution to assist functional assignment in detail. In conjunction with phylogenetic analyses, two different types of putative active sites were identified in DsrE and DsrH and shown to be characteristic for sulfur-oxidizing bacteria. Conserved Cys78 of A. vinosum DsrE corresponds to the active cysteines of Escherichia coli YchN and TusD. TusBCD and the protein TusE are parts of sulfur relay system involved in thiouridine biosynthesis. DsrEFH interacts with DsrC, a TusE homologue encoded in the same operon. The conserved penultimate cysteine residue in the carboxy-terminus of DsrC is essential for the interaction. Here, we show that Cys78 of DsrE is strictly required for interaction with DsrC while Cys20 in the putative active site of DsrH is dispensable for that reaction. In summary, our findings point at the occurrence of sulfur transfer reactions during sulfur oxidation via the Dsr proteins. (C) 2008 Elsevier Ltd. All rights reserved.

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