4.7 Article

Predicting small-molecule solvation free energies: An informal blind test for computational chemistry

Journal

JOURNAL OF MEDICINAL CHEMISTRY
Volume 51, Issue 4, Pages 769-779

Publisher

AMER CHEMICAL SOC
DOI: 10.1021/jm070549+

Keywords

-

Ask authors/readers for more resources

Experimental data on the transfer of small molecules between vacuum and water are relatively sparse. This makes it difficult to assess whether computational methods are truly predictive of this important quantity or merely good at explaining what has been seen. To explore this, a prospective test was performed of two different methods for estimating solvation free energies: an implicit solvent approach based on the Poisson-Boltzmann equation and an explicit solvent approach using alchemical free energy calculations. For a set of 17 small molecules, root mean square errors from experiment were between 1.3 and 2.6 kcal/mol, with the explicit solvent free energy approach yielding somewhat greater accuracy but at. greater computational expense. Insights from outliers and suggestions for future prospective challenges of this kind are presented.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

No Data Available
No Data Available