Related references
Note: Only part of the references are listed.Prediction of epitopes using neural network based methods
Claus Lundegaard et al.
JOURNAL OF IMMUNOLOGICAL METHODS (2011)
Molecular Characterization of Hepatitis C Virus Genotype 4 Sequences in HIV-Coinfected Patients From Argentina
F. Bolcic et al.
JOURNAL OF MEDICAL VIROLOGY (2011)
Relation of pretreatment sequence diversity in NS5A region of HCV genotype 1 with immune response between pegylated-INF/ribavirin therapy outcomes
A. T. L. de Queiroz et al.
JOURNAL OF VIRAL HEPATITIS (2011)
Promiscuous prediction and conservancy analysis of CTL binding epitopes of HCV 3a viral proteome from Punjab Pakistan: an In Silico Approach
Abida Shehzadi et al.
VIROLOGY JOURNAL (2011)
Viral hepatitis and HIV co-infection
Vincent Soriano et al.
ANTIVIRAL RESEARCH (2010)
The Immune Epitope Database 2.0
Randi Vita et al.
NUCLEIC ACIDS RESEARCH (2010)
Phylodynamics of HIV-1 Circulating Recombinant Forms 12_BF and 38_BF in Argentina and Uruguay
Gonzalo Bello et al.
RETROVIROLOGY (2010)
Hepatitis C virus with a naturally occurring single amino-acid substitution in the E2 envelope protein escapes neutralization by naturally-induced and vaccine-induced antibodies
Hongying Duan et al.
VACCINE (2010)
Viral factors influencing the response to the combination therapy of peginterferon plus ribavirin in chronic hepatitis C
Shinya Maekawa et al.
JOURNAL OF GASTROENTEROLOGY (2009)
Influence of the HCV Subtype on the Virological Response to Pegylated Interferon and Ribavirin Therapy
Florence Legrand-Abravanel et al.
JOURNAL OF MEDICAL VIROLOGY (2009)
jpHMM: Improving the reliability of recombination prediction in HIV-1
Anne-Kathrin Schultz et al.
NUCLEIC ACIDS RESEARCH (2009)
Analysis of Sequence Configurations of the PKR-Interacting HCV Proteins from Plasma and PBMC as Predictors of Response to Interferon-Alpha and Ribavirin Therapy in HIV-Coinfected Patients
F. Bolcic et al.
INTERVIROLOGY (2008)
Diversity of hepatitis C virus genotype 1b in Buenos Aires, Argentina: Description of a new cluster associated with response to treatment
Federico Di Lello et al.
JOURNAL OF MEDICAL VIROLOGY (2008)
In Silico tools for predicting peptides binding to HLA-class II molecules: More confusion than conclusion
Uthaman Gowthaman et al.
JOURNAL OF PROTEOME RESEARCH (2008)
A systematic assessment of MHC class II peptide binding predictions and evaluation of a consensus approach
Peng Wang et al.
PLOS COMPUTATIONAL BIOLOGY (2008)
The hepatitis C sequence database in Los Alamos
Carla Kuiken et al.
NUCLEIC ACIDS RESEARCH (2008)
Dendroscope: An interactive viewer for large phylogenetic trees
Daniel H. Huson et al.
BMC BIOINFORMATICS (2007)
Extremely rapid spread of human immunodeficiency virus type 1 BF recombinants in Argentina
Paula C. Aulicino et al.
JOURNAL OF VIROLOGY (2007)
Viral determinants of resistance to treatment in patients with hepatitis C
Anette Wohnsland et al.
CLINICAL MICROBIOLOGY REVIEWS (2007)
jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1
Ming Zhang et al.
NUCLEIC ACIDS RESEARCH (2006)
A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes
Anne-Kathrin Schultz et al.
BMC BIOINFORMATICS (2006)
Relaxed phylogenetics and dating with confidence
Alexei J. Drummond et al.
PLOS BIOLOGY (2006)
Consensus proposals for a unified system of nomenclature of hepatitis C virus genotypes
P Simmonds et al.
HEPATOLOGY (2005)
Hepatitis C virus-related resistance mechanisms to interferon α-based antiviral therapy
WP Hofmann et al.
JOURNAL OF CLINICAL VIROLOGY (2005)
Definition of supertypes for HLA molecules using clustering of specificity matrices
O Lund et al.
IMMUNOGENETICS (2004)
Peginterferon alfa-2a plus ribavirin versus interferon alfa-2a plus ribavirin for chronic hepatitis C in HIV-coinfected persons
RT Chung et al.
NEW ENGLAND JOURNAL OF MEDICINE (2004)
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
S Guindon et al.
SYSTEMATIC BIOLOGY (2003)
Reliable prediction of T-cell epitopes using neural networks with novel sequence representations
M Nielsen et al.
PROTEIN SCIENCE (2003)
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
K Katoh et al.
NUCLEIC ACIDS RESEARCH (2002)
Correlation of genotypes and route of transmission with histologic activity and disease stage in chronic hepatitis C
F Ramalho et al.
DIGESTIVE DISEASES AND SCIENCES (2000)