4.5 Article

Improving ecological forecasts of copepod community dynamics using genetic algorithms

Journal

JOURNAL OF MARINE SYSTEMS
Volume 82, Issue 3, Pages 96-110

Publisher

ELSEVIER
DOI: 10.1016/j.jmarsys.2010.04.001

Keywords

Genetic algorithm; Copepod modeling; Parameter tuning; Ecological forecasting; Computational ecology; Biological-physical coupling; Calanus finmarchicus; Pseudocalanus; Centropages typicus; Cape Cod Bay

Funding

  1. National Science Foundation [0312610]
  2. Biological Oceanography [OCE-0815336]
  3. Directorate For Geosciences
  4. Division Of Ocean Sciences [0312610] Funding Source: National Science Foundation

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The validity of computational models is always in doubt. Skill assessment and validation are typically done by demonstrating that output is in agreement with empirical data. We test this approach by using a genetic algorithm to parameterize a biological-physical coupled copepod population dynamics computation. The model is applied to Cape Cod Bay, Massachusetts, and is designed for operational forecasting. By running twin experiments on terms in this dynamical system, we demonstrate that a good fit to data does not necessarily imply a valid parameterization. An ensemble of good fits, however, provides information on the accuracy of parameter values, on the functional importance of parameters, and on the ability to forecast accurately with an incorrect set of parameters. Additionally, we demonstrate that the technique is a useful tool for operational forecasting. (C) 2010 Elsevier B.V. All rights reserved.

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