4.8 Article

The ReproGenomics Viewer: an integrative cross-species toolbox for the reproductive science community

Journal

NUCLEIC ACIDS RESEARCH
Volume 43, Issue W1, Pages W109-W116

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/nar/gkv345

Keywords

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Funding

  1. Agence nationale de securite sanitaire de l'alimentation, de l'environnement et du travail [ANSES] [EST-13-081]
  2. Fondation pour la recherche medicale [FRM] [DBI20131228558]
  3. European Union [FEDER]

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We report the development of the ReproGenomics Viewer (RGV), amulti- and cross-species working environment for the visualization, mining and comparison of published omics data sets for the reproductive science community. The system currently embeds 15 published data sets related to gametogenesis from nine model organisms. Data sets have been curated and conveniently organized into broad categories including biological topics, technologies, species and publications. RGV's modular design for both organisms and genomic tools enables users to upload and compare their data with that from the data sets embedded in the system in a cross-species manner. The RGV is freely available at http://rgv.genouest.org.

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