4.8 Article

Analysis of long-range interactions in primary human cells identifies cooperative CFTR regulatory elements

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Oxidative Stress Regulates CFTR Gene Expression in Human Airway Epithelial Cells through a Distal Antioxidant Response Element

Zhaolin Zhang et al.

AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY (2015)

Review Microbiology

An Overview of Genome Organization and How We Got There: from FISH to Hi-C

James Fraser et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2015)

Article Biochemistry & Molecular Biology

Hox in motion: tracking HoxA cluster conformation during differentiation

Mathieu Rousseau et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Biotechnology & Applied Microbiology

Classifying leukemia types with chromatin conformation data

Mathieu Rousseau et al.

GENOME BIOLOGY (2014)

Article Biochemistry & Molecular Biology

Architectural Protein Subclasses Shape 3D Organization of Genomes during Lineage Commitment

Jennifer E. Phillips-Cremins et al.

Review Genetics & Heredity

Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data

Job Dekker et al.

NATURE REVIEWS GENETICS (2013)

Article Medicine, Research & Experimental

The Cystic Fibrosis Gene: A Molecular Genetic Perspective

Lap-Chee Tsui et al.

COLD SPRING HARBOR PERSPECTIVES IN MEDICINE (2013)

Review Biochemistry & Molecular Biology

Long distance relationships: Enhancer-promoter communication and dynamic gene transcription

Judith Marsman et al.

BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2012)

Article Biochemistry & Molecular Biology

Functional analysis of a promoter variant identified in the CFTR gene in cis of a frameshift mutation

Victoria Viart et al.

EUROPEAN JOURNAL OF HUMAN GENETICS (2012)

Article Cell Biology

Molecular mechanisms controlling CFTR gene expression in the airway

Zhaolin Zhang et al.

JOURNAL OF CELLULAR AND MOLECULAR MEDICINE (2012)

Article Respiratory System

Functional analysis of synonymous substitutions predicted to affect splicing of the CFTR gene

Alexandra Scott et al.

JOURNAL OF CYSTIC FIBROSIS (2012)

Article Multidisciplinary Sciences

The long-range interaction landscape of gene promoters

Amartya Sanyal et al.

NATURE (2012)

Article Multidisciplinary Sciences

A map of the cis-regulatory sequences in the mouse genome

Yin Shen et al.

NATURE (2012)

Article Multidisciplinary Sciences

Topological domains in mammalian genomes identified by analysis of chromatin interactions

Jesse R. Dixon et al.

NATURE (2012)

Article Multidisciplinary Sciences

Spatial partitioning of the regulatory landscape of the X-inactivation centre

Elphege P. Nora et al.

NATURE (2012)

Article Biochemical Research Methods

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

Maxim Imakaev et al.

NATURE METHODS (2012)

Article Genetics & Heredity

Variants in CFTR untranslated regions are associated with congenital bilateral absence of the vas deferens

Estelle Lopez et al.

JOURNAL OF MEDICAL GENETICS (2011)

Review Medicine, Research & Experimental

Chromatin conformation signatures: ideal human disease biomarkers?

Jennifer L. Crutchley et al.

BIOMARKERS IN MEDICINE (2010)

Article Biochemistry & Molecular Biology

Cell-type-specific long-range looping interactions identify distant regulatory elements of the CFTR gene

Nele Gheldof et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemistry & Molecular Biology

The three-dimensional architecture of Hox cluster silencing

Maria A. Ferraiuolo et al.

NUCLEIC ACIDS RESEARCH (2010)

Review Biochemistry & Molecular Biology

CTCF: Master Weaver of the Genome

Jennifer E. Phillips et al.

Article Cell Biology

A complex intronic enhancer regulates expression of the CFTR gene by direct interaction with the promoter

Christopher J. Ott et al.

JOURNAL OF CELLULAR AND MOLECULAR MEDICINE (2009)

Letter Biochemical Research Methods

My5C: web tools for chromosome conformation capture studies

Bryan R. Lajoie et al.

NATURE METHODS (2009)

Article Biochemistry & Molecular Biology

An insulator element 3 to the CFTR gene binds CTCF and reveals an active chromatin hub in primary cells

Neil P. Blackledge et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Multidisciplinary Sciences

Intronic enhancers coordinate epithelial-specific looping of the active CFTR locus

Christopher J. Ott et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Multidisciplinary Sciences

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

Erez Lieberman-Aiden et al.

SCIENCE (2009)

Article Biochemistry & Molecular Biology

Detection and characterization of silencers and enhancer-blockers in the greater CFTR locus

Hanna M. Petrykowska et al.

GENOME RESEARCH (2008)

Editorial Material Multidisciplinary Sciences

Gene regulation in the third dimension

Job Dekker

SCIENCE (2008)

Article Biochemistry & Molecular Biology

CTCF mediates insulator function at the CFTR locus

Neil P. Blackledge et al.

BIOCHEMICAL JOURNAL (2007)

Article Biochemistry & Molecular Biology

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

Tae Hoon Kim et al.

Article Biochemical Research Methods

Mapping networks of physical interactions between genomic elements using 5C technology

Josee Dostie et al.

NATURE PROTOCOLS (2007)

Article Multidisciplinary Sciences

The active FMR1 promoter is associated with a large domain of altered chromatin conformation with embedded local histone modifications

Nele Gheldof et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Review Genetics & Heredity

Long-range control of gene expression: Emerging mechanisms and disruption in disease

DA Kleinjan et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2005)

Article Multidisciplinary Sciences

Capturing chromosome conformation

J Dekker et al.

SCIENCE (2002)

Article Biochemistry & Molecular Biology

An element in intron 1 of the CFTR gene augments intestinal expression in vivo

RK Rowntree et al.

HUMAN MOLECULAR GENETICS (2001)

Article Biotechnology & Applied Microbiology

Multiple potential Intragenic regulatory elements in the CFTR gene

DJ Smith et al.

GENOMICS (2000)