4.4 Article

A New Force Field for Simulating Phosphatidylcholine Bilayers

Journal

JOURNAL OF COMPUTATIONAL CHEMISTRY
Volume 31, Issue 6, Pages 1117-1125

Publisher

WILEY
DOI: 10.1002/jcc.21396

Keywords

GROMOS 53A6; Chin charges; lipid bilayers; fluid phase; nonbonded interactions

Funding

  1. Swiss National Science Foundation
  2. Australian Research Council (ARC)

Ask authors/readers for more resources

A new force field for the simulation of dipalmitoylphosphatidylcholine (DPPC) in the liquid-crystalline, fluid phase at zero surface tension is presented. The structure of the bilayer with the area per lipid (0.629 nm(2); experiment 0.629-0.64 nm2), the volume per lipid (1.226 nm(3); experiment 1.229-1.232 nm(3)), and the ordering of the palmitoyl chains (order parameters) are all in very good agreement with experiment. Experimental electron density profiles are well reproduced in particular with regard to the penetration of water into the bilayer. The force field was further validated by simulating the spontaneous assembly of DPPC into a bilayer in water. Notably, the timescale on which membrane sealing was observed using this model appears closer to the timescales for membrane resealing suggested by electroporation experiments than previous simulations using existing models. (C) 2009 Wiley Periodicals, Inc. J Comput Chem 31; 1117-1125. 2010

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.4
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

No Data Available
No Data Available