4.7 Article

Understanding the EF-hand closing pathway using non-biased interatomic potentials

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Insights into modulation of calcium signaling by magnesium in calmodulin, troponin C and related EF-hand proteins

Zenon Grabarek

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2011)

Article Biochemistry & Molecular Biology

FADD-calmodulin interaction: A novel player in cell cycle regulation

Giuliana Papoff et al.

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2010)

Article Biochemistry & Molecular Biology

Calmodulin dissociation regulates Myo5 recruitment and function at endocytic sites

Helga Groetsch et al.

EMBO JOURNAL (2010)

Article Pharmacology & Pharmacy

Interactions of Calmodulin With the Multiple Binding Sites of Cav1.2 Ca2+ Channels

Hadhimulya Asmara et al.

JOURNAL OF PHARMACOLOGICAL SCIENCES (2010)

Article Biochemical Research Methods

Integrated Protein Array Screening and High Throughput Validation of 70 Novel Neural Calmodulin-binding Proteins

David J. O'Connell et al.

MOLECULAR & CELLULAR PROTEOMICS (2010)

Article Multidisciplinary Sciences

Calmodulin Interaction with hEAG1 Visualized by FRET Microscopy

J. Tiago Goncalves et al.

PLOS ONE (2010)

Article Biochemistry & Molecular Biology

Allosteric effects of the antipsychotic drug trifluoperazine on the energetics of calcium binding by calmodulin

Michael D. Feldkamp et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2010)

Article Multidisciplinary Sciences

Inherent flexibility determines the transition mechanisms of the EF-hands of calmodulin

Swarnendu Tripathi et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Biochemistry & Molecular Biology

Ca2+ dissociation from the C-terminal EF-hand pair in calmodulin:: A steered molecular dynamics study

Yong Zhang et al.

FEBS LETTERS (2008)

Article Biochemistry & Molecular Biology

Self-assembly of amyloid-forming peptides by molecular dynamics simulations

Guanghong Wei

Frontiers in Bioscience-Landmark (2008)

Article Chemistry, Physical

The complex folding pathways of protein A suggest a multiple-funnelled energy landscape

Jean-Francois St-Pierre et al.

JOURNAL OF CHEMICAL PHYSICS (2008)

Article Multidisciplinary Sciences

Efficient and verified simulation of a path ensemble for conformational change in a united-residue model of calmodulin

Bin W. Zhang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemistry & Molecular Biology

A coarse-grained protein force field for folding and structure prediction

Julien Maupetit et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2007)

Review Biochemistry & Molecular Biology

Structures and metal-ion-binding properties of the Ca2+-binding helix-loop-helix EF-hand motifs

Jessica L. Gifford et al.

BIOCHEMICAL JOURNAL (2007)

Article Chemistry, Physical

Sampling small-scale and large-scale conformational changes in proteins and molecular complexes

Mi-Ran Yun et al.

JOURNAL OF CHEMICAL PHYSICS (2007)

Article Chemistry, Multidisciplinary

Slow conformational dynamics and unfolding of the calmodulin C-terminal domain

Yng-Gwei Chen et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2007)

Article Biophysics

A natural coarse graining for simulating large biomolecular motion

Holger Gohlke et al.

BIOPHYSICAL JOURNAL (2006)

Review Biochemistry & Molecular Biology

Structural basis for diversity of the EF-hand calcium-binding proteins

Zenon Grabarek

JOURNAL OF MOLECULAR BIOLOGY (2006)

Article Biochemistry & Molecular Biology

ARTIST: An activated method in internal coordinate space for sampling protein energy landscapes

Mi-Ran Yun et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2006)

Article Biochemical Research Methods

Principal component analysis of the conformational freedom within the EF-hand superfamily

E Babini et al.

JOURNAL OF PROTEOME RESEARCH (2005)

Article Multidisciplinary Sciences

Scanning the human proteome for calmodulin-binding proteins

XC Shen et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemistry & Molecular Biology

Structure of a trapped intermediate of calmodulin: Calcium regulation of EF-hand proteins from a new perspective

Z Grabarek

JOURNAL OF MOLECULAR BIOLOGY (2005)

Article Biophysics

Sampling the self-assembly pathways of KFFE hexamers

GH Wei et al.

BIOPHYSICAL JOURNAL (2004)

Article Biochemistry & Molecular Biology

Pathway complexity of Alzheimer's β-amyloid Aβ16-22 peptide assembly

S Santini et al.

STRUCTURE (2004)

Article Biochemistry & Molecular Biology

Crystal structure of kinesin regulated by Ca2+-calmodulin

MV Vinogradova et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2004)

Article Chemistry, Physical

Sampling the complex energy landscape of a simple β-hairpin

GH Wei et al.

JOURNAL OF CHEMICAL PHYSICS (2003)

Article Biochemistry & Molecular Biology

Molecular dynamics simulations revealed Ca2+-dependent conformational change of Calmodulin

Y Komeiji et al.

FEBS LETTERS (2002)

Article Biochemistry & Molecular Biology

Solution structure of Ca2+-calmodulin reveals flexible hand-like properties of its domains

JJ Chou et al.

NATURE STRUCTURAL BIOLOGY (2001)

Article Biophysics

Functional dynamics of the hydrophobic cleft in the N-domain of calmodulin

D Vigil et al.

BIOPHYSICAL JOURNAL (2001)

Article Biochemical Research Methods

Sampling activated mechanisms in proteins with the activation-relaxation technique

N Mousseau et al.

JOURNAL OF MOLECULAR GRAPHICS & MODELLING (2001)

Article Biochemistry & Molecular Biology

EF-hand calcium-binding proteins

A Lewit-Bentley et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2000)

Article Materials Science, Multidisciplinary

C incorporation in epitaxial Ge1-yCy layers grown on Ge(001):: An ab initio study

D Gall et al.

PHYSICAL REVIEW B (2000)

Article Multidisciplinary Sciences

The crystal structure of calcium-free human m-calpain suggests an electrostatic switch mechanism for activation by calcium

S Strobl et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)