Related references
Note: Only part of the references are listed.An integral equation theory for inhomogeneous molecular fluids: The reference interaction site model approach
R. Ishizuka et al.
JOURNAL OF CHEMICAL PHYSICS (2008)
Combination of molecular dynamics method and 3D-RISM theory for conformational sampling of large flexible molecules in solution
Tatsuhiko Miyata et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2008)
Spontaneous formation of KCl aggregates in biomolecular simulations: A force field issue?
Pascal Auffinger et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2007)
Theoretical analysis on changes in thermodynamic quantities upon protein folding: Essential role of hydration
Takashi Imai et al.
JOURNAL OF CHEMICAL PHYSICS (2007)
Nucleic acid solvation: from outside to insight
Pascal Auffinger et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2007)
Locating missing water molecules in protein cavities by the three-dimensional reference interaction site model theory of molecular solvation
Takashi Imai et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2007)
What drives proteins into the major or minor grooves of DNA?
Peter L. Privalov et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
DNA deformability and hydration studied by molecular dynamics simulation
Y. Yonetani et al.
MOLECULAR SIMULATION (2007)
Solvent participation in Serratia marcescens endonuclease complexes
CY Chen et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2006)
Recent results on hydrogen and hydration in biology studied by neutron macromolecular crystallography
N Niimura et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2006)
Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)(2) observed by neutron diffraction measurements
S Arai et al.
NUCLEIC ACIDS RESEARCH (2005)
DNA and its counterions:: a molecular dynamics study
P Várnai et al.
NUCLEIC ACIDS RESEARCH (2004)
Molecular dynamics simulations of the 136 unique tetranucleotide sequences of DNA oligonucleotides.: I.: Research design and results on d(CpG) steps
DL Beveridge et al.
BIOPHYSICAL JOURNAL (2004)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Potentials of mean force of simple ions in ambient aqueous solution. I. Three-dimensional reference interaction site model approach
A Kovalenko et al.
JOURNAL OF CHEMICAL PHYSICS (2000)
Potentials of mean force of simple ions in ambient aqueous solution. II. Solvation structure from the three-dimensional reference interaction site model approach, and comparison with simulations
A Kovalenko et al.
JOURNAL OF CHEMICAL PHYSICS (2000)