4.7 Article

Bayesian estimates of free energies from nonequilibrium work data in the presence of instrument noise

Related references

Note: Only part of the references are listed.
Article Physics, Fluids & Plasmas

Work distribution for the adiabatic compression of a dilute and interacting classical gas

Gavin E. Crooks et al.

PHYSICAL REVIEW E (2007)

Article Physics, Fluids & Plasmas

Free-energy reconstruction from experiments performed under different biasing programs

David D. L. Minh

PHYSICAL REVIEW E (2006)

Article Chemistry, Physical

On the sampling requirements for exponential-work free-energy calculations

D. A. Kofke

MOLECULAR PHYSICS (2006)

Article Physics, Condensed Matter

Single-molecule experiments in biological physics: methods and applications

F. Ritort

JOURNAL OF PHYSICS-CONDENSED MATTER (2006)

Article Physics, Fluids & Plasmas

Rare events and the convergence of exponentially averaged work values

C Jarzynski

PHYSICAL REVIEW E (2006)

Article Physics, Multidisciplinary

Optimal estimates of free energies from multistate nonequilibrium work data

P Maragakis et al.

PHYSICAL REVIEW LETTERS (2006)

Article Chemistry, Physical

Equilibrium free energies from fast-switching trajectories with large time steps

W Lechner et al.

JOURNAL OF CHEMICAL PHYSICS (2006)

Article Physics, Condensed Matter

Demonstration of the steady-state fluctuation theorem from a single trajectory

GM Wang et al.

JOURNAL OF PHYSICS-CONDENSED MATTER (2005)

Article Physics, Fluids & Plasmas

Work-probability distribution in systems driven out of equilibrium

A Imparato et al.

PHYSICAL REVIEW E (2005)

Review Chemistry, Multidisciplinary

Free energy surfaces from single-molecule force spectroscopy

G Hummer et al.

ACCOUNTS OF CHEMICAL RESEARCH (2005)

Article Physics, Multidisciplinary

The nonequilibrium thermodynamics of small systems

C Bustamante et al.

PHYSICS TODAY (2005)

Article Physics, Multidisciplinary

An experimental test of the Jarzynski equality in a mechanical experiment

F Douarche et al.

EUROPHYSICS LETTERS (2005)

Article Physics, Multidisciplinary

Experimental test of the fluctuation theorem for a driven two-level system with time-dependent rates

S Schuler et al.

PHYSICAL REVIEW LETTERS (2005)

Article Chemistry, Physical

Practical applicability of the Jarzynski relation in statistical mechanics: A pedagogical example

RC Lua et al.

JOURNAL OF PHYSICAL CHEMISTRY B (2005)

Article Physics, Fluids & Plasmas

Experimental study of the fluctuation theorem in a nonequilibrium steady state

GM Wang et al.

PHYSICAL REVIEW E (2005)

Article Chemistry, Physical

Using non-Gaussian density functional fits to improve relative free energy calculations

H Nanda et al.

JOURNAL OF CHEMICAL PHYSICS (2005)

Article Physics, Fluids & Plasmas

Work distribution functions in polymer stretching experiments

A Dhar

PHYSICAL REVIEW E (2005)

Article Physics, Multidisciplinary

Work probability distribution in single-molecule experiments

A Imparato et al.

EUROPHYSICS LETTERS (2005)

Article Mechanics

Nonequilibrium work theorem for a system strongly coupled to a thermal environment

C Jarzynski

JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT (2004)

Article Physics, Multidisciplinary

Periodically driven stochastic un- and refolding transitions of biopolymers

O Braun et al.

EUROPHYSICS LETTERS (2004)

Article Chemistry, Multidisciplinary

Efficient use of nonequilibrium measurement to estimate free energy differences for molecular systems

FM Ytreberg et al.

JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)

Article Multidisciplinary Sciences

Experimental test of Hatano and Sasa's nonequilibrium steady-state equality

EH Trepagnier et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Article Physics, Multidisciplinary

Probing molecular free energy landscapes by periodic loading

O Braun et al.

PHYSICAL REVIEW LETTERS (2004)

Article Multidisciplinary Sciences

Bias and error in estimates of equilibrium free-energy differences from nonequilibrium measurements

J Gore et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Article Physics, Multidisciplinary

Equilibrium free energies from nonequilibrium measurements using maximum-likelihood methods

MR Shirts et al.

PHYSICAL REVIEW LETTERS (2003)

Article Chemistry, Physical

Free energy calculation from steered molecular dynamics simulations using Jarzynski's equality

S Park et al.

JOURNAL OF CHEMICAL PHYSICS (2003)

Article Chemistry, Physical

A non-equilibrium free energy theorem for deterministic systems

DJ Evans

MOLECULAR PHYSICS (2003)

Article Chemistry, Physical

Equilibrium free energies from path sampling of nonequilibrium trajectories

SX Sun

JOURNAL OF CHEMICAL PHYSICS (2003)

Review Physics, Condensed Matter

The fluctuation theorem

DJ Evans et al.

ADVANCES IN PHYSICS (2002)

Article Chemistry, Physical

Fast-growth thermodynamic integration: Results for sodium ion hydration

G Hummer

MOLECULAR SIMULATION (2002)

Article Chemistry, Physical

Fast-growth thermodynamic integration: Error and efficiency analysis

G Hummer

JOURNAL OF CHEMICAL PHYSICS (2001)

Article Chemistry, Physical

A fast growth method of computing free energy differences

DA Hendrix et al.

JOURNAL OF CHEMICAL PHYSICS (2001)

Article Multidisciplinary Sciences

Free energy reconstruction from nonequilibrium single-molecule pulling experiments

G Hummer et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)

Article Physics, Fluids & Plasmas

Path-ensemble averages in systems driven far from equilibrium

GE Crooks

PHYSICAL REVIEW E (2000)