4.6 Article

Ontology-enhanced automatic chief complaint classification for syndromic surveillance

Journal

JOURNAL OF BIOMEDICAL INFORMATICS
Volume 41, Issue 2, Pages 340-356

Publisher

ACADEMIC PRESS INC ELSEVIER SCIENCE
DOI: 10.1016/j.jbi.2007.08.009

Keywords

medical ontology; UMLS; free-text chief complaints; chief complaint classification; syndromic surveillance; bootstrapping; statistical evaluation

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Emergency department free-text chief complaints (CCs) are a major data source for syndromic surveillance. CCs need to be classified into syndromic categories for subsequent automatic analysis. However, the lack of a standard vocabulary and high-quality encodings of CCs hinder effective classification. This paper presents a new ontology-enhanced automatic CC classification approach. Exploiting semantic relations in a medical ontology, this approach is motivated to address the CC vocabulary variation problem in general and to meet the specific need for a classification approach capable of handling multiple sets of syndromic categories. We report an experimental study comparing our approach with two popular CC classification methods using a real-world dataset. This study indicates that our ontology-enhanced approach performs significantly better than the benchmark methods in terms of sensitivity, F measure, and F2 measure. (c) 2007 Elsevier Inc. All rights reserved.

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