4.4 Article

Lateral Transfer of Genes and Gene Fragments in Staphylococcus Extends beyond Mobile Elements

Related references

Note: Only part of the references are listed.
Article Public, Environmental & Occupational Health

Case Report: Fatal Staphylococcal Infection following Classic Dengue Fever

Stanley Almeida Araujo et al.

AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE (2010)

Review Biochemistry & Molecular Biology

Mobile genetic elements of Staphylococcus aureus

Natalia Malachowa et al.

CELLULAR AND MOLECULAR LIFE SCIENCES (2010)

Review Infectious Diseases

Management of Staphylococcus aureus bacteremia and endocarditis: progresses and challenges

Winfried V. Kern

CURRENT OPINION IN INFECTIOUS DISEASES (2010)

Review Microbiology

Horizontal gene transfer and the genomics of enterococcal antibiotic resistance

Kelli L. Palmer et al.

CURRENT OPINION IN MICROBIOLOGY (2010)

Review Microbiology

Antibiotic resistance in the environment: a link to the clinic?

Gerard D. Wright

CURRENT OPINION IN MICROBIOLOGY (2010)

Article Evolutionary Biology

The Tree and Net Components of Prokaryote Evolution

Pere Puigbo et al.

GENOME BIOLOGY AND EVOLUTION (2010)

Article Evolutionary Biology

Evolutionary Dynamics of Complete Campylobacter Pan-Genomes and the Bacterial Species Concept

Tristan Lefebure et al.

GENOME BIOLOGY AND EVOLUTION (2010)

Review Microbiology

Genomic variation and evolution of Staphylococcus aureus

Jodi A. Lindsay

INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY (2010)

Review Microbiology

The phage-related chromosomal islands of Gram-positive bacteria

Richard P. Novick et al.

NATURE REVIEWS MICROBIOLOGY (2010)

Review Microbiology

Origins and Evolution of Antibiotic Resistance

Julian Davies et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2010)

Article Infectious Diseases

Revisiting Methicillin-Resistant Staphylococcus aureus Infections

Abdelkarim Waness

JOURNAL OF GLOBAL INFECTIOUS DISEASES (2010)

Review Microbiology

VanA-Type Vancomycin-Resistant Staphylococcus aureus

Bruno Perichon et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2009)

Review Biology

Prokaryotic evolution and the tree of life are two different things

Eric Bapteste et al.

BIOLOGY DIRECT (2009)

Editorial Material Biology

The fundamental units, processes and patterns of evolution, and the Tree of Life conundrum

Eugene V. Koonin et al.

BIOLOGY DIRECT (2009)

Article Biochemical Research Methods

BLAST plus : architecture and applications

Christiam Camacho et al.

BMC BIOINFORMATICS (2009)

Article Biology

Aphids acquired symbiotic genes via lateral gene transfer

Naruo Nikoh et al.

BMC BIOLOGY (2009)

Article Evolutionary Biology

Lateral Transfer of Genes and Gene Fragments in Prokaryotes

Cheong Xin Chan et al.

GENOME BIOLOGY AND EVOLUTION (2009)

Review Immunology

Staphylococcal Infections: A Historical Perspective

Henry R. Shinefield et al.

INFECTIOUS DISEASE CLINICS OF NORTH AMERICA (2009)

Editorial Material Immunology

Vancomycin Heteroresistance and Methicillin-Resistant Staphylococcus aureus

Stan Deresinski

JOURNAL OF INFECTIOUS DISEASES (2009)

Article Biochemistry & Molecular Biology

Lines of Evidence for Horizontal Gene Transfer of a Phenazine Producing Operon into Multiple Bacterial Species

David A. Fitzpatrick

JOURNAL OF MOLECULAR EVOLUTION (2009)

Article Biochemistry & Molecular Biology

An Ancient Horizontal Gene Transfer between Mosquito and the Endosymbiotic Bacterium Wolbachia pipientis

Megan Woolfit et al.

MOLECULAR BIOLOGY AND EVOLUTION (2009)

Review Microbiology

Bacterial gene amplification: implications for the evolution of antibiotic resistance

Linus Sandegren et al.

NATURE REVIEWS MICROBIOLOGY (2009)

Review Microbiology

Waves of resistance: Staphylococcus aureus in the antibiotic era

Henry F. Chambers et al.

NATURE REVIEWS MICROBIOLOGY (2009)

Review Microbiology

Staphylococcus epidermidis - the 'accidental' pathogen

Michael Otto

NATURE REVIEWS MICROBIOLOGY (2009)

Article Multidisciplinary Sciences

Are Protein Domains Modules of Lateral Genetic Transfer?

Cheong Xin Chan et al.

PLOS ONE (2009)

Review Biology

Lateral genetic transfer: open issues

Mark A. Ragan et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2009)

Article Multidisciplinary Sciences

Phage-Mediated Intergeneric Transfer of Toxin Genes

John Chen et al.

SCIENCE (2009)

Review Genetics & Heredity

Bacterial Toxin-Antitoxin Systems: More Than Selfish Entities?

Laurence Van Melderen et al.

PLOS GENETICS (2009)

Article Biochemistry & Molecular Biology

High-throughput functional annotation and data mining with the Blast2GO suite

Stefan Gotz et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Biotechnology & Applied Microbiology

Ectopic gene conversions in bacterial genomes

Robert T. Morris et al.

GENOME (2007)

Article Biochemical Research Methods

Detecting recombination in evolving nucleotide sequences

Cheong Xin Chan et al.

BMC BIOINFORMATICS (2006)

Article Biochemistry & Molecular Biology

Phylogenetic analyses of cyanobacterial genomes: Quantification of horizontal gene transfer events

Olga Zhaxybayeva et al.

GENOME RESEARCH (2006)

Article Multidisciplinary Sciences

Reducing the fitness cost of antibiotic resistance by amplification of initiator tRNA genes

AI Nilsson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Multidisciplinary Sciences

Recombination between elongation factor 1α genes from distantly related archaeal lineages

Y Inagaki et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemistry & Molecular Biology

Pfam: clans, web tools and services

Robert D. Finn et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Multidisciplinary Sciences

Highways of gene sharing in prokaryotes

RG Beiko et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Multidisciplinary Sciences

Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection

M Kuroda et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemical Research Methods

Dual multiple change-point model leads to more accurate recombination detection

VN Minin et al.

BIOINFORMATICS (2005)

Article Biochemical Research Methods

A word-oriented approach to alignment validation

RG Beiko et al.

BIOINFORMATICS (2005)

Article Biochemistry & Molecular Biology

Evolutionary origins of genomic repertoires in bacteria

E Lerat et al.

PLOS BIOLOGY (2005)

Article Biochemical Research Methods

A hybrid clustering approach to recognition of protein families in 114 microbial genomes

TJ Harlow et al.

BMC BIOINFORMATICS (2004)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)

Review Biochemistry & Molecular Biology

Staphylococcus aureus:: superbug, super genome?

JA Lindsay et al.

TRENDS IN MICROBIOLOGY (2004)

Article Biology

Does a tree-like phylogeny only exist at the tips in the prokaryotes?

CJ Creevey et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2004)

Article Multidisciplinary Sciences

Complete genomes of two clinical Staphylococcus aureus strains:: Evidence for the rapid evolution of virulence and drug resistance

MTG Holden et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Article Biochemistry & Molecular Biology

SCOP database in 2004: refinements integrate structure and sequence family data

A Andreeva et al.

NUCLEIC ACIDS RESEARCH (2004)

Article Biochemistry & Molecular Biology

Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228)

YQ Zhang et al.

MOLECULAR MICROBIOLOGY (2003)

Article Biochemical Research Methods

MrBayes 3: Bayesian phylogenetic inference under mixed models

F Ronquist et al.

BIOINFORMATICS (2003)

Article Microbiology

How clonal is Staphylococcus aureus?

EJ Feil et al.

JOURNAL OF BACTERIOLOGY (2003)

Article Biochemistry & Molecular Biology

Crystal structure of the MazE/MazF complex: Molecular bases of antidote-toxin recognition

K Kamada et al.

MOLECULAR CELL (2003)

Article Biotechnology & Applied Microbiology

Evolution of mosaic operons by horizontal gene transfer and gene displacement in situ

MV Omelchenko et al.

GENOME BIOLOGY (2003)

Article Biotechnology & Applied Microbiology

Duplication is more common among laterally transferred genes than among indigenous genes

SD Hooper et al.

GENOME BIOLOGY (2003)

Article Medicine, General & Internal

Genome and virulence determinants of high virulence community-acquired MRSA

T Baba et al.

LANCET (2002)

Article Biochemistry & Molecular Biology

An efficient algorithm for large-scale detection of protein families

AJ Enright et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Biochemistry & Molecular Biology

Gene duplication and gene conversion shape the evolution of archaeal chaperonins

JM Archibald et al.

JOURNAL OF MOLECULAR BIOLOGY (2002)

Article Biology

Inferring confidence sets of possibly misspecified gene trees

K Strimmer et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2002)

Article Biochemical Research Methods

TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

HA Schmidt et al.

BIOINFORMATICS (2002)

Article Medicine, General & Internal

Whole genome sequencing of meticillin-resistant Staphylococcus aureus

M Kuroda et al.

LANCET (2001)

Article Biochemistry & Molecular Biology

Horizontal transfer of the photosynthesis gene cluster and operon rearrangement in purple bacteria

N Igarashi et al.

JOURNAL OF MOLECULAR EVOLUTION (2001)

Review Microbiology

Recombination and the population structures of bacterial pathogens

EJ Feil et al.

ANNUAL REVIEW OF MICROBIOLOGY (2001)

Article Evolutionary Biology

Likelihood-based tests of topologies in phylogenetics

N Goldman et al.

SYSTEMATIC BIOLOGY (2000)

Article Multidisciplinary Sciences

The evolutionary fate and consequences of duplicate genes

M Lynch et al.

SCIENCE (2000)

Article Biochemistry & Molecular Biology

T-Coffee: A novel method for fast and accurate multiple sequence alignment

C Notredame et al.

JOURNAL OF MOLECULAR BIOLOGY (2000)

Article Multidisciplinary Sciences

Interpreting the universal phylogenetic tree

CR Woese

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)

Review Genetics & Heredity

Homology - a personal view on some of the problems

WM Fitch

TRENDS IN GENETICS (2000)