Journal
NATURE REVIEWS GASTROENTEROLOGY & HEPATOLOGY
Volume 12, Issue 5, Pages 253-254Publisher
NATURE PUBLISHING GROUP
DOI: 10.1038/nrgastro.2015.46
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This commentary outlines our expanding understanding of resident bacterial compartmentalization along the longitudinal and vertical intestinal axes and suggests optimal approaches to sampling the microbiota. Although readily available and noninvasive, faecal microbiota are not fully representative of mucosally associated bacterial communities, which might uniquely interact with epithelial and immune cells.
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