4.8 Article

Structure of the E. coli ribosome-EF-Tu complex at <3 Å resolution by Cs-corrected cryo-EM

Related references

Note: Only part of the references are listed.
Article Microbiology

Synergy of Streptogramin Antibiotics Occurs Independently of Their Effects on Translation

Jonas Noeske et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2014)

Article Biochemistry & Molecular Biology

Amicoumacin A Inhibits Translation by Stabilizing mRNA Interaction with the Ribosome

Yury S. Polikanov et al.

MOLECULAR CELL (2014)

Article Biochemical Research Methods

Quantifying the local resolution of cryo-EMEM density maps

Alp Kucukelbir et al.

NATURE METHODS (2014)

Article Biochemistry & Molecular Biology

Structure modulation of helix 69 from Escherichia coli 23S ribosomal RNA by pseudouridylations

Jun Jiang et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Multidisciplinary Sciences

Structure of β-galactosidase at 3.2-Å resolution obtained by cryo-electron microscopy

Alberto Bartesaghi et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Biochemical Research Methods

Deformable elastic network refinement for low-resolution macromolecular crystallography

Gunnar F. Schroeder et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2014)

Article Biochemical Research Methods

GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit

Sander Pronk et al.

BIOINFORMATICS (2013)

Article Biochemical Research Methods

Correcting pervasive errors in RNA crystallography through enumerative structure prediction

Fang-Chieh Chou et al.

NATURE METHODS (2013)

Article Biochemistry & Molecular Biology

Energy barriers and driving forces in tRNA translocation through the ribosome

Lars V. Bock et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)

Article Multidisciplinary Sciences

Control of Ribosomal Subunit Rotation by Elongation Factor G

Arto Pulk et al.

SCIENCE (2013)

Article Biochemical Research Methods

Ribosome engineering to promote new crystal forms

Maria Selmer et al.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2012)

Article Microbiology

Fitness Cost and Interference of Arm/Rmt Aminoglycoside Resistance with the RsmF Housekeeping Methyltransferases

Belen Gutierrez et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2012)

Article Biochemistry & Molecular Biology

RELION: Implementation of a Bayesian approach to cryo-EM structure determination

Sjors H. W. Scheres

JOURNAL OF STRUCTURAL BIOLOGY (2012)

Article Biochemistry & Molecular Biology

Impact of methylations of m2G966/m5C967 in 16S rRNA on bacterial fitness and translation initiation

Dmitry E. Burakovsky et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Multidisciplinary Sciences

Linking Crystallographic Model and Data Quality

P. Andrew Karplus et al.

SCIENCE (2012)

Article Microbiology

Inactivation of the Indigenous Methyltransferase RlmN in Staphylococcus aureus Increases Linezolid Resistance

Jacqueline M. LaMarre et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2011)

Article Biochemistry & Molecular Biology

Methylated 23S rRNA nucleotide m2G1835 of Escherichia coli ribosome facilitates subunit association

Ilya A. Osterman et al.

BIOCHIMIE (2011)

Article Biochemistry & Molecular Biology

Helix 69 Is Key for Uniformity during Substrate Selection on the Ribosome

Rodrigo F. Ortiz-Meoz et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2011)

Article Biochemistry & Molecular Biology

How mutations in tRNA distant from the anticodon affect the fidelity of decoding

T. Martin Schmeing et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)

Article Multidisciplinary Sciences

Structures of the Bacterial Ribosome in Classical and Hybrid States of tRNA Binding

Jack A. Dunkle et al.

SCIENCE (2011)

Article Biochemical Research Methods

Features and development of Coot

P. Emsley et al.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)

Article Biochemical Research Methods

PHENIX: a comprehensive Python-based system for macromolecular structure solution

Paul D. Adams et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2010)

Article Multidisciplinary Sciences

Super-resolution biomolecular crystallography with low-resolution data

Gunnar F. Schroeder et al.

NATURE (2010)

Article Multidisciplinary Sciences

Ribosome dynamics and tRNA movement by time-resolved electron cryomicroscopy

Niels Fischer et al.

NATURE (2010)

Article Biochemistry & Molecular Biology

Structural rearrangements of the ribosome at the tRNA proofreading step

Lasse Jenner et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2010)

Article Biochemistry & Molecular Biology

Fine-tuning of the ribosomal decoding center by conserved methyl-modifications in the Escherichia coli 16S rRNA

Satoshi Kimura et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemistry & Molecular Biology

The crystal structure of unmodified tRNA(Phe) from Escherichia coli

Robert T. Byrne et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemistry & Molecular Biology

Structural signatures of antibiotic binding sites on the ribosome

Hilda David-Eden et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Multidisciplinary Sciences

The Mechanism for Activation of GTP Hydrolysis on the Ribosome

Rebecca M. Voorhees et al.

SCIENCE (2010)

Article Biochemistry & Molecular Biology

The Native 3D Organization of Bacterial Polysomes

Florian Brandt et al.

Article Biochemistry & Molecular Biology

Refinement of Protein Structures into Low-Resolution Density Maps Using Rosetta

Frank DiMaio et al.

JOURNAL OF MOLECULAR BIOLOGY (2009)

Article Multidisciplinary Sciences

Structural Insight into Nascent Polypeptide Chain-Mediated Translational Stalling

Birgit Seidelt et al.

SCIENCE (2009)

Article Multidisciplinary Sciences

The Crystal Structure of the Ribosome Bound to EF-Tu and Aminoacyl-tRNA

T. Martin Schmeing et al.

SCIENCE (2009)

Article Biochemistry & Molecular Biology

Role of 16S ribosomal RNA methylations in translation initiation in Escherichia coli

Gautam Das et al.

EMBO JOURNAL (2008)

Article Chemistry, Medicinal

Crystal structure of the oxazolidinone antibiotic linezolid bound to the 50S ribosomal subunit

Joseph A. Ippolito et al.

JOURNAL OF MEDICINAL CHEMISTRY (2008)

Article Biochemical Research Methods

Version 1.2 of the Crystallography and NMR system

Axel T. Brunger

NATURE PROTOCOLS (2007)

Article Biochemical Research Methods

Crystallographic refinement of ligand complexes

Gerard J. Kleywegt

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Structural analysis of kasugamycin inhibition of translation

Barbara S. Schuwirth et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2006)

Article Multidisciplinary Sciences

Structure of the 70S ribosome complexed with mRNA and tRNA

Maria Selmer et al.

SCIENCE (2006)

Article Biochemistry & Molecular Biology

The HHpred interactive server for protein homology detection and structure prediction

J Söding et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Chemistry, Multidisciplinary

UCSF chimera - A visualization system for exploratory research and analysis

EF Pettersen et al.

JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)

Article Biochemistry & Molecular Biology

Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy

PB Rosenthal et al.

JOURNAL OF MOLECULAR BIOLOGY (2003)

Article Biochemistry & Molecular Biology

Essential role of histidine 84 in elongation factor Tu for the chemical step of GTP hydrolysis on the ribosome

T Daviter et al.

JOURNAL OF MOLECULAR BIOLOGY (2003)

Article Biochemistry & Molecular Biology

Automatic CTF correction for single particles based upon multivariate statistical analysis of individual power spectra

B Sander et al.

JOURNAL OF STRUCTURAL BIOLOGY (2003)

Article Biochemistry & Molecular Biology

Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process

M Valle et al.

EMBO JOURNAL (2002)

Article Chemistry, Multidisciplinary

The Computational Crystallography Toolbox:: crystallographic algorithms in a reusable software framework

RW Grosse-Kunstleve et al.

JOURNAL OF APPLIED CRYSTALLOGRAPHY (2002)

Article Biochemical Research Methods

Maximum-likelihood density modification

TC Terwilliger

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2000)

Article Biochemical Research Methods

Structural changes in a cryo-cooled protein crystal owing to radiation damage

WP Burmeister

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2000)