4.5 Article

AMPLIMODES: symmetry-mode analysis on the Bilbao Crystallographic Server

Journal

JOURNAL OF APPLIED CRYSTALLOGRAPHY
Volume 42, Issue -, Pages 820-833

Publisher

WILEY-BLACKWELL
DOI: 10.1107/S0021889809028064

Keywords

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Funding

  1. Spanish Ministry of Science and Technology [MAT2008-05839]
  2. Basque Government [IT-282-07]

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AMPLIMODES is a computer program available on the Bilbao Crystallographic Server that can perform a symmetry-mode analysis of any distorted structure of displacive type. The analysis consists in decomposing the symmetry-breaking distortion present in the distorted structure into contributions from different symmetry-adapted modes. Given the high-and the low-symmetry structures, AMPLIMODES determines the atomic displacements that relate them, defines a basis of symmetry-adapted modes, and calculates the amplitudes and polarization vectors of the distortion modes of different symmetry frozen in the structure. The program uses a mode parameterization that is as close as possible to the crystallographic conventions, expressing all quantities for the asymmetric unit of the low-symmetry structure. Distorted structures are often related to their higher-symmetry counterparts by temperature- and/or pressure-driven phase transitions, ferroic phase transitions being a particular example. The automatic symmetry-mode analysis performed by AMPLIMODES can be very useful for establishing the driving mechanisms of such structural phase transitions or the fundamental instabilities at the origin of the distorted phases.

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