4.8 Article

Efficient Production of Single-Stranded Phage DNA as Scaffolds for DNA Origami

Journal

NANO LETTERS
Volume 15, Issue 7, Pages 4672-4676

Publisher

AMER CHEMICAL SOC
DOI: 10.1021/acs.nanolett.5b01461

Keywords

DNA origami; single-stranded DNA; bacteriophage M13; high-cell-density fermentation; self-assembly

Funding

  1. Deutsche Forschungsgemeinschaft (DFG) through TUM International Graduate School of Science and Engineering (IGSSE)
  2. Excellence Cluster Center for Integrated Protein Science, Nano Initiative Munich [Sonderforschungsbereich SFB863]
  3. European Research Council [t256270]

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Scaffolded DNA origami enables the fabrication of a variety of complex nanostructures that promise utility in diverse fields of application, ranging from biosensing over advanced therapeutics to metamaterials. The broad applicability of DNA origami as a material beyond the level of proof-of-concept studies critically depends, among other factors, on the availability of large amounts of pure single-stranded scaffold DNA. Here, We present a method for the efficient production of M13 bacteriophage-derived genomic DNA using high-cell-density fermentation of Escherichia coli in stirred-tank bioreactors. We achieve phage titers of up to 1.6 x 10(14) plaque-forming units per mL. Downstream processing yields up to 410 mg of high-quality single-stranded DNA per one liter reaction volume, thus upgrading DNA origami-based nanotechnology from the milligram to the gram scale.

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