4.8 Article

Loss in microbial diversity affects nitrogen cycling in soil

Related references

Note: Only part of the references are listed.
Article Multidisciplinary Sciences

Accounting For Alignment Uncertainty in Phylogenomics

Martin Wu et al.

PLOS ONE (2012)

Article Biotechnology & Applied Microbiology

Molecular biomass and MetaTaxogenomic assessment of soil microbial communities as influenced by soil DNA extraction procedure

Sebastien Terrat et al.

MICROBIAL BIOTECHNOLOGY (2012)

Article Biotechnology & Applied Microbiology

Barcoded Primers Used in Multiplex Amplicon Pyrosequencing Bias Amplification

David Berry et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)

Article Biochemical Research Methods

HMM-FRAME: accurate protein domain classification for metagenomic sequences containing frameshift errors

Yuan Zhang et al.

BMC BIOINFORMATICS (2011)

Article Microbiology

Global patterns in the biogeography of bacterial taxa

Diana R. Nemergut et al.

ENVIRONMENTAL MICROBIOLOGY (2011)

Article Ecology

Function-specific response to depletion of microbial diversity

Hannes Peter et al.

ISME JOURNAL (2011)

Review Multidisciplinary Sciences

Terrestrial Ecosystem Responses to Species Gains and Losses

David A. Wardle et al.

SCIENCE (2011)

Article Biochemical Research Methods

Picante: R tools for integrating phylogenies and ecology

Steven W. Kembel et al.

BIOINFORMATICS (2010)

Article Ecology

Reduction of rare soil microbes modifies plant-herbivore interactions

W. H. Gera Hol et al.

ECOLOGY LETTERS (2010)

Letter Biochemical Research Methods

QIIME allows analysis of high-throughput community sequencing data

J. Gregory Caporaso et al.

NATURE METHODS (2010)

Article Multidisciplinary Sciences

Bacterial Biodiversity-Ecosystem Functioning Relations Are Modified by Environmental Complexity

Silke Langenheder et al.

PLOS ONE (2010)

Article Biotechnology & Applied Microbiology

Contrasting Soil pH Effects on Fungal and Bacterial Growth Suggest Functional Redundancy in Carbon Mineralization

Johannes Rousk et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)

Article Ecology

Testing the functional significance of microbial community composition

Michael S. Strickland et al.

ECOLOGY (2009)

Article Multidisciplinary Sciences

Initial community evenness favours functionality under selective stress

Lieven Wittebolle et al.

NATURE (2009)

Article Biology

A common tendency for phylogenetic overdispersion in mammalian assemblages

Natalie Cooper et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2008)

Article Biochemical Research Methods

Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation

Ivica Letunic et al.

BIOINFORMATICS (2007)

Letter Biotechnology & Applied Microbiology

Measuring species richness based on microbial community fingerprints: The emperor has no clothes

Stephen J. Bent et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)

Article Microbiology

Maintenance of soil functioning following erosion of microbial diversity

Sophie Wertz et al.

ENVIRONMENTAL MICROBIOLOGY (2006)

Article Biochemical Research Methods

RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Alexandros Stamatakis

BIOINFORMATICS (2006)

Review Biotechnology & Applied Microbiology

Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes

PH Janssen

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)

Article Biotechnology & Applied Microbiology

Nitrous oxide reductase genes (nosZ) of denitrifying microbial populations in soil and the earthworm gut are phylogenetically similar

MA Horn et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)

Article Biotechnology & Applied Microbiology

UniFrac: a new phylogenetic method for comparing microbial communities

C Lozupone et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)

Article Multidisciplinary Sciences

The contribution of species richness and composition to bacterial services

T Bell et al.

NATURE (2005)

Article Ecology

Does functional redundancy exist?

M Loreau

OIKOS (2004)

Article Biochemistry & Molecular Biology

ARB:: a software environment for sequence data

W Ludwig et al.

NUCLEIC ACIDS RESEARCH (2004)

Review Ecology

Functional diversity revealed by removal experiments

S Díaz et al.

TRENDS IN ECOLOGY & EVOLUTION (2003)

Review Soil Science

Microbial diversity and soil functions

P Nannipieri et al.

EUROPEAN JOURNAL OF SOIL SCIENCE (2003)

Article Multidisciplinary Sciences

Prokaryotic diversity -: Magnitude, dynamics, and controlling factors

V Torsvik et al.

SCIENCE (2002)

Article Biotechnology & Applied Microbiology

Impact of dilution on microbial community structure and functional potential: Comparison of numerical simulations and batch culture experiments

RB Franklin et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2001)

Review Multidisciplinary Sciences

Consequences of changing biodiversity

FS Chapin et al.

NATURE (2000)