Related references
Note: Only part of the references are listed.Metagenomic islands of hyperhalophiles: the case of Salinibacter ruber
Lejla Pasic et al.
BMC GENOMICS (2009)
Metagenomic signatures of 86 microbial and viral metagenomes
Dana Willner et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Genomic analysis of multiple Roseophage SIO1 strains
Florent Angly et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Bacteriophages drive strain diversification in a marine Flavobacterium: implications for phage resistance and physiological properties
Mathias Middelboe et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Diel and daily fluctuations in virioplankton production in coastal ecosystems
Danielle M. Winget et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Quantitative PCR reveals transient and persistent algal viruses in Lake Ontario, Canada
Steven M. Short et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Diverse and dynamic populations of cyanobacterial podoviruses in the Chesapeake Bay unveiled through DNA polymerase gene sequences
Feng Chen et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Dickeya species relatedness and clade structure determined by comparison of recA sequences
Neil Parkinson et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
OPINION Explaining microbial population genomics through phage predation
Francisco Rodriguez-Valera et al.
NATURE REVIEWS MICROBIOLOGY (2009)
Local Adaptation of Bacteriophages to Their Bacterial Hosts in Soil
Michiel Vos et al.
SCIENCE (2009)
The RAST server: Rapid annotations using subsystems technology
Ramy K. Aziz et al.
BMC GENOMICS (2008)
A bacterial metapopulation adapts locally to phage predation despite global dispersal
Victor Kunin et al.
GENOME RESEARCH (2008)
Functional metagenomic profiling of nine biomes
Elizabeth A. Dinsdale et al.
NATURE (2008)
Biodiversity and biogeography of phages in modern stromatolites and thrombolites
Christelle Desnues et al.
NATURE (2008)
Microbial Ecology of Four Coral Atolls in the Northern Line Islands
Elizabeth A. Dinsdale et al.
PLOS ONE (2008)
Virus population dynamics and acquired virus resistance in natural microbial communities
Anders F. Andersson et al.
SCIENCE (2008)
Large Variabilities in host strain susceptibility and phage host range govern interactions between lytic marine phages and their Flavobactetium hosts
Karin Holmfeldt et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
Selection and characterization of cyanophage resistance in marine Synechococcus strains
Lauren I. Stoddard et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
Power law rank-abundance models for marine phage communities
Karl Heinz Hoffmann et al.
FEMS MICROBIOLOGY LETTERS (2007)
Genomic plasticity in prokaryotes: the case of the square haloarchaeon
Sara Cuadros-Orellana et al.
ISME JOURNAL (2007)
Archaeal and bacterial community composition of sediment and plankton from a suboxic freshwater pond
Celine Briee et al.
RESEARCH IN MICROBIOLOGY (2007)
MEGAN analysis of metagenomic data
Daniel H. Huson et al.
GENOME RESEARCH (2007)
The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
J. R. Cole et al.
NUCLEIC ACIDS RESEARCH (2007)
An obesity-associated gut microbiome with increased capacity for energy harvest
Peter J. Turnbaugh et al.
NATURE (2006)
The marine viromes of four oceanic regions
Florent E. Angly et al.
PLOS BIOLOGY (2006)
Annually reoccurring bacterial communities are predictable from ocean conditions
Jed A. Fuhrman et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
UniFrac - An online tool for comparing microbial community diversity in a phylogenetic context
Catherine Lozupone et al.
BMC BIOINFORMATICS (2006)
Environmental genomics of Haloquadratum walsbyi in a saltern crystallizer indicates a large pool of accessory genes in an otherwise coherent species
Boris A. Legault et al.
BMC GENOMICS (2006)
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
T. Z. DeSantis et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
PHY•FI:: fast and easy online creation and manipulation of phylogeny color figures
Jakob Fredslund
BMC BIOINFORMATICS (2006)
Using pyrosequencing to shed light on deep mine microbial ecology
Robert A. Edwards et al.
BMC GENOMICS (2006)
An application of statistics to comparative metagenomics
Beltran Rodriguez-Brito et al.
BMC BIOINFORMATICS (2006)
Evolutionary feedback mediated through population density, illustrated with viruses in chemostats
JJ Bull et al.
AMERICAN NATURALIST (2006)
UniFrac: a new phylogenetic method for comparing microbial communities
C Lozupone et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Distribution of typical freshwater bacterial groups is associated with pH, temperature, and lake water retention time
ES Lindström et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Method for discovering novel DNA viruses in blood using viral particle selection and shotgun sequencing
M Breitbart et al.
BIOTECHNIQUES (2005)
Impact of phages on two-species bacterial communities
WR Harcombe et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Comparative metagenomics of microbial communities
SG Tringe et al.
SCIENCE (2005)
PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information
F Angly et al.
BMC BIOINFORMATICS (2005)
Geographic and environmental sources of variation in lake bacterial community composition
AC Yannarell et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
R Overbeek et al.
NUCLEIC ACIDS RESEARCH (2005)
Environmental genome shotgun sequencing of the Sargasso Sea
JC Venter et al.
SCIENCE (2004)
Diversity and population structure of a near-shore marine-sediment viral community
M Breitbart et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2004)
Community structure and metabolism through reconstruction of microbial genomes from the environment
GW Tyson et al.
NATURE (2004)
A taxa-area relationship for bacteria
MC Horner-Devine et al.
NATURE (2004)
Genetic fingerprinting of Flavobacterium columnare isolates from cultured fish
CR Arias et al.
JOURNAL OF APPLIED MICROBIOLOGY (2004)
Metagenomic analyses of an uncultured viral community from human feces
M Breitbart et al.
JOURNAL OF BACTERIOLOGY (2003)
Comprehensive aligned sequence construction for automated design of effective probes (CASCADE-P) using 16S rDNA
TZ DeSantis et al.
BIOINFORMATICS (2003)
Nitrogenase gene diversity and microbial community structure: a cross-system comparison
JP Zehr et al.
ENVIRONMENTAL MICROBIOLOGY (2003)
Viral influence on aquatic bacterial communities
JA Fuhrman et al.
BIOLOGICAL BULLETIN (2003)
Genomic analysis of uncultured marine viral communities
M Breitbart et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
The Phage Proteomic Tree: a genome-based taxonomy for phage
F Rohwer et al.
JOURNAL OF BACTERIOLOGY (2002)
Prokaryotic genetic diversity throughout the salinity gradient of a coastal solar saltern
S Benlloch et al.
ENVIRONMENTAL MICROBIOLOGY (2002)
Phylogenetic diversity of marine cyanophage isolates and natural virus communities as revealed by sequences of viral capsid assembly protein gene g20
Y Zhong et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2002)
Reverse transcriptase-mediated tropism switching in Bordetella bacteriophage
MS Liu et al.
SCIENCE (2002)
Effects of bacteriophages on the population dynamics of four strains of pelagic marine bacteria
M Middelboe et al.
MICROBIAL ECOLOGY (2001)
Linking genetic change to community evolution: insights from studies of bacteria and bacteriophage
BJM Bohannan et al.
ECOLOGY LETTERS (2000)
Rapid virus production and removal as measured with fluorescently labeled viruses as tracers
RT Noble et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2000)
Share Paper
