Related references
Note: Only part of the references are listed.Serum Albumin Domain Structures in Human Blood Serum by Mass Spectrometry and Computational Biology
Adam Belsom et al.
MOLECULAR & CELLULAR PROTEOMICS (2016)
Xlink Analyzer: Software for analysis and visualization of cross-linking data in the context of three-dimensional structures
Jan Kosinski et al.
JOURNAL OF STRUCTURAL BIOLOGY (2015)
xiNET: Cross-link Network Maps With Residue Resolution
Colin W. Combe et al.
MOLECULAR & CELLULAR PROTEOMICS (2015)
A strategy for dissecting the architectures of native macromolecular assemblies
Yi Shi et al.
NATURE METHODS (2015)
Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry
Fan Liu et al.
NATURE METHODS (2015)
Chemical cross-linking and mass spectrometry to determine the subunit interaction network in a recombinant human SAGA HAT subcomplex
Nha-Thi Nguyen-Huynh et al.
PROTEIN SCIENCE (2015)
Three-dimensional topology of the SMC2/SMC4 subcomplex from chicken condensin I revealed by cross-linking and molecular modelling
Helena Barysz et al.
OPEN BIOLOGY (2015)
Towards elucidating the stability, dynamics and architecture of the nucleosome remodeling and deacetylase complex by using quantitative interaction proteomics
Susan L. Kloet et al.
FEBS JOURNAL (2015)
Accurate Protein Complex Retrieval by Affinity Enrichment Mass Spectrometry (AE-MS) Rather than Affinity Purification Mass Spectrometry (AP-MS)
Eva C. Keilhauer et al.
MOLECULAR & CELLULAR PROTEOMICS (2015)
Architecture of the Saccharomyces cerevisiae SAGA transcription coactivator complex
Yan Han et al.
EMBO JOURNAL (2014)
Matching Cross-linked Peptide Spectra: Only as Good as the Worse Identification
Michael J. Trnka et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
A New in Vivo Cross-linking Mass Spectrometry Platform to Define Protein-Protein Interactions in Living Cells
Robyn M. Kaake et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ
Juergen Cox et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
ProteomeXchange provides globally coordinated proteomics data submission and dissemination
Juan A. Vizcaino et al.
NATURE BIOTECHNOLOGY (2014)
A robust pipeline for rapid production of versatile nanobody repertoires
Peter C. Fridy et al.
NATURE METHODS (2014)
A comparative cross-linking strategy to probe conformational changes in protein complexes
Carla Schmidt et al.
NATURE PROTOCOLS (2014)
SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information
Marco Biasini et al.
NUCLEIC ACIDS RESEARCH (2014)
Chemical cross-linking/mass spectrometry targeting acidic residues in proteins and protein complexes
Alexander Leitner et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Characterization of a DNA exit gate in the human cohesin ring
Pim J. Huis in 't Veld et al.
SCIENCE (2014)
Closing the cohesin ring: Structure and function of its Smc3-kleisin interface
Thomas G. Gligoris et al.
SCIENCE (2014)
Structure and Subunit Topology of the INO80 Chromatin Remodeler and Its Nucleosome Complex
Alessandro Tosi et al.
CELL (2013)
Molecular Architecture of the ATP-Dependent Chromatin-Remodeling Complex SWR1
Vu Q. Nguyen et al.
CELL (2013)
Quantitative cross-linking/mass spectrometry using isotope-labelled cross-linkers
Lutz Fischer et al.
JOURNAL OF PROTEOMICS (2013)
An asymmetric SMC-kleisin bridge in prokaryotic condensin
Frank Buermann et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)
Comparative cross-linking and mass spectrometry of an intact F-type ATPase suggest a role for phosphorylation
Carla Schmidt et al.
NATURE COMMUNICATIONS (2013)
UCSF Chimera, MODELLER, and IMP: An integrated modeling system
Zheng Yang et al.
JOURNAL OF STRUCTURAL BIOLOGY (2012)
Expanding the Chemical Cross-Linking Toolbox by the Use of Multiple Proteases and Enrichment by Size Exclusion Chromatography
Alexander Leitner et al.
MOLECULAR & CELLULAR PROTEOMICS (2012)
A cross-platform toolkit for mass spectrometry and proteomics
Matthew C. Chambers et al.
NATURE BIOTECHNOLOGY (2012)
False discovery rate estimation for cross-linked peptides identified by mass spectrometry
Thomas Walzthoeni et al.
NATURE METHODS (2012)
Identification of cross-linked peptides from complex samples
Bing Yang et al.
NATURE METHODS (2012)
Optimizing the enrichment of cross-linked products for mass spectrometric protein analysis
Romy Fritzsche et al.
RAPID COMMUNICATIONS IN MASS SPECTROMETRY (2012)
Affinity-purification coupled to mass spectrometry: Basic principles and strategies
Wade H. Dunham et al.
PROTEOMICS (2012)
Structural Probing of a Protein Phosphatase 2A Network by Chemical Cross-Linking and Mass Spectrometry
Franz Herzog et al.
SCIENCE (2012)
Molecular architecture of human polycomb repressive complex 2
Claudio Ciferri et al.
ELIFE (2012)
ProDy: Protein Dynamics Inferred from Theory and Experiments
Ahmet Bakan et al.
BIOINFORMATICS (2011)
Quantitative Proteomics for Epigenetics
H. Christian Eberl et al.
CHEMBIOCHEM (2011)
A positively charged channel within the Smc1/Smc3 hinge required for sister chromatid cohesion
Alexander Kurze et al.
EMBO JOURNAL (2011)
The beginning of a beautiful friendship: Cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes
Juri Rappsilber
JOURNAL OF STRUCTURAL BIOLOGY (2011)
An Isotopically Coded CID-cleavable Biotinylated Cross-linker for Structural Proteomics
Evgeniy V. Petrotchenko et al.
MOLECULAR & CELLULAR PROTEOMICS (2011)
Quantitative proteomics combined with BAC TransgeneOmics reveals in vivo protein interactions
Nina C. Hubner et al.
JOURNAL OF CELL BIOLOGY (2010)
Probing Native Protein Structures by Chemical Cross-linking, Mass Spectrometry, and Bioinformatics
Alexander Leitner et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
Structural Insights into the Calmodulin-Munc13 Interaction Obtained by Cross-Linking and Mass Spectrometry
Kalina Dimova et al.
BIOCHEMISTRY (2009)
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
Juergen Cox et al.
NATURE BIOTECHNOLOGY (2008)
BAC TransgeneOmics:: a high-throughput method for exploration of protein function in mammals
Ina Poser et al.
NATURE METHODS (2008)
Analysis of protein complexes using mass spectrometry
Anne-Claude Gingras et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2007)
Crystal structure of human phosphoribosylpyrophosphate synthetase 1 reveals a novel allosteric site
Sheng Li et al.
BIOCHEMICAL JOURNAL (2007)
Structural model of full-length human Ku70-Ku80 heterodimer and its recognition of DNA and DNA-PKcs
Angel Rivera-Calzada et al.
EMBO REPORTS (2007)
Tools for integrated sequence-structure analysis with UCSF Chimera
Elaine C. Meng et al.
BMC BIOINFORMATICS (2006)
Isolation of the Cdc45/Mcm2-7/GINS (CMG) complex, a candidate for the eukaryotic DNA replication fork helicase
Stephen E. Moyer et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions
Andrea Sinz
MASS SPECTROMETRY REVIEWS (2006)
Structure and stability of cohesin's Smc1-kleisin interaction
CH Haering et al.
MOLECULAR CELL (2004)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
SWISS-MODEL: an automated protein homology-modeling server
T Schwede et al.
NUCLEIC ACIDS RESEARCH (2003)
Structure of the Ku heterodimer bound to DNA and its implications for double-strand break repair
JR Walker et al.
NATURE (2001)
Stepwise regulated chromatin assembly of MCM2-7 proteins
D Maiorano et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
Sequential MCM/P1 subcomplex assembly is required to form a heterohexamer with replication licensing activity
TA Prokhorova et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)