4.7 Review

What Macromolecular Crowding Can Do to a Protein

Journal

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 15, Issue 12, Pages 23090-23140

Publisher

MDPI
DOI: 10.3390/ijms151223090

Keywords

macromolecular crowding; excluded volume; protein structure; protein folding; protein function; protein-protein interaction; intrinsically disordered protein; protein aggregation

Funding

  1. Russian Science Foundation RSCF [14-24-00131]
  2. Russian Science Foundation [14-24-00131] Funding Source: Russian Science Foundation

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The intracellular environment represents an extremely crowded milieu, with a limited amount of free water and an almost complete lack of unoccupied space. Obviously, slightly salted aqueous solutions containing low concentrations of a biomolecule of interest are too simplistic to mimic the real life situation, where the biomolecule of interest scrambles and wades through the tightly packed crowd. In laboratory practice, such macromolecular crowding is typically mimicked by concentrated solutions of various polymers that serve as model crowding agents. Studies under these conditions revealed that macromolecular crowding might affect protein structure, folding, shape, conformational stability, binding of small molecules, enzymatic activity, protein-protein interactions, protein-nucleic acid interactions, and pathological aggregation. The goal of this review is to systematically analyze currently available experimental data on the variety of effects of macromolecular crowding on a protein molecule. The review covers more than 320 papers and therefore represents one of the most comprehensive compendia of the current knowledge in this exciting area.

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