Related references
Note: Only part of the references are listed.Normal Mode Analysis of Biomolecular Structures: Functional Mechanisms of Membrane Proteins
Ivet Bahar et al.
CHEMICAL REVIEWS (2010)
A Second Look at Mini-Protein Stability: Analysis of FSD-1 Using Circular Dichroism, Differential Scanning Calorimetry, and Simulations
Jianwen A. Feng et al.
BIOPHYSICAL JOURNAL (2009)
Protein structure prediction: when is it useful?
Yang Zhang
CURRENT OPINION IN STRUCTURAL BIOLOGY (2009)
Insights from Coarse-Grained Go Models for Protein Folding and Dynamics
Ronald D. Hills et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2009)
Folding Mechanism of Beta-Hairpin Trpzip2: Heterogeneity, Transition State and Folding Pathways
Yi Xiao et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2009)
Protein Folding Simulations: From Coarse-Grained Model to All-Atom Model
Jian Zhang et al.
IUBMB LIFE (2009)
Understanding protein folding cooperativity based on topological consideration
L. Wu et al.
JOURNAL OF CHEMICAL PHYSICS (2009)
Protein folding: Then and now
Yiwen Chen et al.
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2008)
Protein unfolding behavior studied by elastic network model
Ji Guo Su et al.
BIOPHYSICAL JOURNAL (2008)
Zinc metalloproteins as medicinal targets
A. I. Anzellotti et al.
CHEMICAL SOCIETY REVIEWS (2008)
Coarse-grained models of protein folding: toy models or predictive tools?
Cecilia Clementi
CURRENT OPINION IN STRUCTURAL BIOLOGY (2008)
Metal-coupled folding of Cys2His2 zinc-finger
Wenfei Li et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2008)
Coupling between global dynamics and signal transduction pathways: a mechanism of allostery for chaperonin GroEL
Chakra Chennubhotla et al.
MOLECULAR BIOSYSTEMS (2008)
Evolving model of amino acid networks
Shan Chang et al.
PHYSICAL REVIEW E (2008)
Predicting the order in which contacts are broken during single molecule protein stretching experiments
Joanna I. Sulkowska et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2008)
Effects of zinc binding on the conformational distribution of the amyloid-β peptide based on molecular dynamics simulations
Wenfei Li et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2007)
All-electron calculations of the nucleation structures in metal-induced zinc-finger folding: Role of the peptide backbone
Todor Dudev et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2007)
Understanding the folding and stability of a zinc finger-based full sequence design protein with replica exchange molecular dynamics simulations
Wenfei Li et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2007)
Construction and application of the weighted amino acid network based on energy
Xiong Jiao et al.
PHYSICAL REVIEW E (2007)
Analysis of domain movements in glutamine-binding protein with simple models
Ji Guo Su et al.
BIOPHYSICAL JOURNAL (2007)
The Gaussian network model: Precise prediction of residue fluctuations and application to binding problems
Burak Erman
BIOPHYSICAL JOURNAL (2006)
Designer zinc-finger proteins and their applications
M Papworth et al.
GENE (2006)
Improvement on a simplified model for protein folding simulation
M Zhang et al.
PHYSICAL REVIEW E (2005)
Coarse-grained normal mode analysis in structural biology
I Bahar et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2005)
iGNM:: a database of protein functional motions based on Gaussian Network Model
LW Yang et al.
BIOINFORMATICS (2005)
Mechanism of zinc coordination by point-mutated structures of the distal CCHC binding motif of the HIV-1NCp7 proteins
E Bombarda et al.
BIOCHEMISTRY (2005)
Folding simulations of small proteins
SY Kim et al.
BIOPHYSICAL CHEMISTRY (2005)
Probing metal-protein interactions using a de novo design approach
D Ghosh et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2005)
How similar are protein folding and protein binding nuclei? Examination of vibrational motions of energy hot spots and conserved residues
T Haliloglu et al.
BIOPHYSICAL JOURNAL (2005)
Amyloid accomplices and enforcers
Andrei T. Alexandrescu
PROTEIN SCIENCE (2004)
Role of cofactors in metalloprotein folding
CJ Wilson et al.
QUARTERLY REVIEWS OF BIOPHYSICS (2004)
The role of plastic β-hairpin and weak hydrophobic core in the stability and unfolding of a full sequence design protein
HX Lei et al.
JOURNAL OF CHEMICAL PHYSICS (2004)
Understanding metalloprotein folding using a de novo design strategy
D Ghosh et al.
INORGANIC CHEMISTRY (2004)
Role of cofactors in folding of the blue-copper protein azurin
P Wittung-Stafshede
INORGANIC CHEMISTRY (2004)
Structure-based thermodynamic analysis of a coupled metal binding-protein folding reaction involving a zinc finger peptide
CA Blasie et al.
BIOCHEMISTRY (2002)
Elastic properties of proteins: Insight on the folding process and evolutionary selection of native structures
C Micheletti et al.
JOURNAL OF MOLECULAR BIOLOGY (2002)
Contribution of individual zinc ligands to metal binding and peptide folding of zinc finger peptides
A Nomura et al.
INORGANIC CHEMISTRY (2002)
Molecular dynamics study of peptides in implicit water:: Ab initio folding of β-hairpin,β-sheet, and ββα-motif
S Jang et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2002)
Protein folding: the free energy surface
M Gruebele
CURRENT OPINION IN STRUCTURAL BIOLOGY (2002)
Zinc finger proteins: new insights into structural and functional diversity
JH Laity et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2001)
Anisotropy of fluctuation dynamics of proteins with an elastic network model
AR Atilgan et al.
BIOPHYSICAL JOURNAL (2001)