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A manually curated network of the PML nuclear body interactome reveals an important role for PML-NBs in SUMOylation dynamics

Journal

INTERNATIONAL JOURNAL OF BIOLOGICAL SCIENCES
Volume 6, Issue 1, Pages 51-67

Publisher

IVYSPRING INT PUBL
DOI: 10.7150/ijbs.6.51

Keywords

PML-NB; SUMOylation; Cytoscape; protein-protein interaction; network

Funding

  1. University of Antwerp [BOF-UA-2005]
  2. Institute for the Promotion of Innovation through Science and Technology in Flanders (IWT-Vlaanderen)
  3. Flemish Institute supporting Scientific-Technological Research in industry (IWT) [IWT-600450]

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Promyelocytic Leukaemia Protein nuclear bodies (PML-NBs) are dynamic nuclear protein aggregates. To gain insight in PML-NB function, reductionist and high throughput techniques have been employed to identify PML-NB proteins. Here we present a manually curated network of the PML-NB interactome based on extensive literature review including database information. By compiling 'the PML-ome', we highlighted the presence of interactors in the Small Ubiquitin Like Modifier (SUMO) conjugation pathway. Additionally, we show an enrichment of SUMOylatable proteins in the PML-NBs through an in-house prediction algorithm. Therefore, based on the PML network, we hypothesize that PML-NBs may function as a nuclear SUMOylation hotspot.

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